RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 MYO1BO43795 1136 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 NOVP48745 357 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 CACNB3P54284 484 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 HMGN5P82970 282 aaKnown RBP19■□□□□ 0.63
RFTN1-209ENST00000483671 PPP2R5BQ15173 497 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 SLC4A8Q2Y0W8 1093 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 NFXL1Q6ZNB6 911 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 SH3BP5LQ7L8J4 393 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 FAM83AQ86UY5 434 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 FOXP4Q8IVH2 680 aaPredicted RBP19■□□□□ 0.63
RFTN1-209ENST00000483671 NSUN7Q8NE18 718 aaKnown RBP19■□□□□ 0.63
RFTN1-209ENST00000483671 ZKSCAN3Q9BRR0 538 aa19■□□□□ 0.63
RFTN1-209ENST00000483671 WNT10BO00744 389 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 CTDNEP1O95476 244 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 GJB2P29033 226 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 FAM47AQ5JRC9 791 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 IFIT1BQ5T764 474 aaKnown RBP18.99■□□□□ 0.63
RFTN1-209ENST00000483671 RCSD1Q6JBY9 416 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 SYNE3Q6ZMZ3 975 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 FAM151AQ8WW52 585 aa18.99■□□□□ 0.63
RFTN1-209ENST00000483671 SIPA1L1O43166 1804 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 CNTNAP1P78357 1384 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 DDTLA6NHG4 134 aaPredicted RBP18.98■□□□□ 0.63
RFTN1-209ENST00000483671 DDAH1O94760 285 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 BRD1O95696 1058 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 PDCP20941 246 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 SHMT1P34896 483 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 METAP2P50579 478 aaKnown RBP eCLIP18.98■□□□□ 0.63
RFTN1-209ENST00000483671 MICALL2Q8IY33 904 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 ZNF654Q8IZM8 581 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 IL17RBQ9NRM6 502 aa18.98■□□□□ 0.63
RFTN1-209ENST00000483671 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
RFTN1-209ENST00000483671 CALM1P0DP23 149 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 CALM2P0DP24 149 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 CALM3P0DP25 149 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 CCT2P78371 535 aaKnown RBP18.97■□□□□ 0.63
RFTN1-209ENST00000483671 TCP10Q12799 353 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 RGS22Q8NE09 1264 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 CCDC17Q96LX7 622 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 NCOA5Q9HCD5 579 aaKnown RBP18.97■□□□□ 0.63
RFTN1-209ENST00000483671 FAM217BQ9NTX9 383 aaPredicted RBP18.97■□□□□ 0.63
RFTN1-209ENST00000483671 NAP1L2Q9ULW6 460 aaPredicted RBP18.97■□□□□ 0.63
RFTN1-209ENST00000483671 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
RFTN1-209ENST00000483671 IGKV6D-41A0A0C4DH26 115 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 CCDC196A0A1B0GTZ2 297 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 SHTN1A0MZ66 631 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 PTPDC1A2A3K4 754 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 GOLGA8AA7E2F4 631 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 CDKL5O76039 1030 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 TROAPQ12815 778 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 TATDN1Q6P1N9 297 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 CATIPQ7Z7H3 387 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 MICU3Q86XE3 530 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 MAP3K14Q99558 947 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 GPRC5DQ9NZD1 345 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 HERC5Q9UII4 1024 aaKnown RBP18.96■□□□□ 0.63
RFTN1-209ENST00000483671 ZDHHC9Q9Y397 364 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 KIF3AQ9Y496 699 aa18.96■□□□□ 0.63
RFTN1-209ENST00000483671 WDR33Q9C0J8 1336 aaKnown RBP18.95■□□□□ 0.62
RFTN1-209ENST00000483671 ZC3H4Q9UPT8 1303 aaKnown RBP18.95■□□□□ 0.62
RFTN1-209ENST00000483671 GREB1LQ9C091 1923 aaPredicted RBP18.95■□□□□ 0.62
RFTN1-209ENST00000483671 CLRN2A0PK11 232 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 H7C1D1 291 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 NMT2O60551 498 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 JAK2O60674 1132 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 SYT1P21579 422 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 PKP1Q13835 747 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 NBPF9Q3BBW0 867 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 CPLX2Q6PUV4 134 aaKnown RBP18.95■□□□□ 0.62
RFTN1-209ENST00000483671 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.95■□□□□ 0.62
RFTN1-209ENST00000483671 RNF181Q9P0P0 153 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 PGAP2Q9UHJ9 254 aa18.95■□□□□ 0.62
RFTN1-209ENST00000483671 TCP10L2B9ZVM9 353 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 SOCS7O14512 581 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 CPLX1O14810 134 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 STX6O43752 255 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 TNFAIP1Q13829 316 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 NTRK3Q16288 839 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 RTN1Q16799 776 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 ZSCAN29Q8IWY8 852 aaPredicted RBP18.94■□□□□ 0.62
RFTN1-209ENST00000483671 FANCBQ8NB91 859 aa18.94■□□□□ 0.62
RFTN1-209ENST00000483671 TNPO1Q92973 898 aaKnown RBP18.94■□□□□ 0.62
RFTN1-209ENST00000483671 TBC1D12O60347 775 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 GRIN3BO60391 1043 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 EGFRP00533 1210 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 IFNAR1P17181 557 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 CDC27P30260 824 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 TNNI2P48788 182 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 MAP3K10Q02779 954 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 KIF4BQ2VIQ3 1234 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 C9orf131Q5VYM1 1079 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 CRACR2BQ8N4Y2 399 aaPredicted RBP18.93■□□□□ 0.62
RFTN1-209ENST00000483671 CSRNP1Q96S65 589 aa18.93■□□□□ 0.62
RFTN1-209ENST00000483671 RBM28Q9NW13 759 aaKnown RBP18.93■□□□□ 0.62
RFTN1-209ENST00000483671 STK36Q9NRP7 1315 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms