RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ABTB2Q8N961 1025 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 ZNF622Q969S3 477 aaKnown RBP eCLIP13.38□□□□□ -0.27
VTI1A-205ENST00000483122 MMS19Q96T76 1030 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 PAG1Q9NWQ8 432 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 TRIM10Q9UDY6 481 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
VTI1A-205ENST00000483122 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 C4BP0C0L5 1744 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 MYO1FO00160 1098 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 GYPCP04921 128 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 USP8P40818 1118 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 SARSP49591 514 aaKnown RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 STX17P56962 302 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 ANTXR2P58335 489 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 NEURL1BA8MQ27 555 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 ENC1O14682 589 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 KIF1CO43896 1103 aaKnown RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 SRGAP2O75044 1071 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 MAP9Q49MG5 647 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 POTEDQ86YR6 584 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 PRPF38AQ8NAV1 312 aaKnown RBP13.37□□□□□ -0.27
VTI1A-205ENST00000483122 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 SLF1Q9BQI6 1058 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 DACH1Q9UI36 760 aa13.37□□□□□ -0.27
VTI1A-205ENST00000483122 RNF225M0QZC1 329 aaPredicted RBP13.36□□□□□ -0.27
VTI1A-205ENST00000483122 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
VTI1A-205ENST00000483122 CDC25AP30304 524 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 PLCD1P51178 756 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 GNGT1P63211 74 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 PPFIA1Q13136 1202 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 NT5DC1Q5TFE4 455 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 TRAPPC11Q7Z392 1133 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 ADD3Q9UEY8 706 aaKnown RBP13.36□□□□□ -0.27
VTI1A-205ENST00000483122 WWC3Q9ULE0 1092 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 NWD2Q9ULI1 1742 aa13.36□□□□□ -0.27
VTI1A-205ENST00000483122 EIF3HO15372 352 aaKnown RBP eCLIP13.35□□□□□ -0.27
VTI1A-205ENST00000483122 RXRAP19793 462 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 GCKRQ14397 625 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 MB21D2Q8IYB1 491 aaPredicted RBP13.35□□□□□ -0.27
VTI1A-205ENST00000483122 HINFPQ9BQA5 517 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.35□□□□□ -0.27
VTI1A-205ENST00000483122 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
VTI1A-205ENST00000483122 DDX58O95786 925 aaKnown RBP13.35□□□□□ -0.27
VTI1A-205ENST00000483122 FNTAP49354 379 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 LMOD2Q6P5Q4 547 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 PHKBQ93100 1093 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 CAPZA3Q96KX2 299 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
VTI1A-205ENST00000483122 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 CD44P16070 742 aaKnown RBP13.34□□□□□ -0.27
VTI1A-205ENST00000483122 FECHP22830 423 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 GBP6Q6ZN66 633 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
VTI1A-205ENST00000483122 NEUROD6Q96NK8 337 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 MYD88Q99836 296 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 MYO1AQ9UBC5 1043 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 ZMYM6O95789 1325 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 SLIT3O75094 1523 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 UBE2Q2LH0YL09 131 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 FOXP2O15409 715 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 ATP1A1P05023 1023 aaKnown RBP13.34□□□□□ -0.27
VTI1A-205ENST00000483122 SCP2P22307 547 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 GPTP24298 496 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 PDIA6Q15084 440 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 CNGA4Q8IV77 575 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 ELOA2Q8IYF1 753 aaPredicted RBP13.34□□□□□ -0.27
VTI1A-205ENST00000483122 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
VTI1A-205ENST00000483122 GOLGA6BA6NDN3 693 aa13.33□□□□□ -0.27
VTI1A-205ENST00000483122 RNF113AO15541 343 aaKnown RBP13.33□□□□□ -0.27
VTI1A-205ENST00000483122 COBLO75128 1261 aa13.33□□□□□ -0.27
VTI1A-205ENST00000483122 A1BGP04217 495 aa13.33□□□□□ -0.27
VTI1A-205ENST00000483122 MCM3P25205 808 aa13.33□□□□□ -0.27
VTI1A-205ENST00000483122 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.27
VTI1A-205ENST00000483122 CCNI2Q6ZMN8 369 aaPredicted RBP13.33□□□□□ -0.27
VTI1A-205ENST00000483122 TFR2Q9UP52 801 aa13.33□□□□□ -0.27
VTI1A-205ENST00000483122 REXO2Q9Y3B8 237 aaKnown RBP13.33□□□□□ -0.27
VTI1A-205ENST00000483122 ERCC5P28715 1186 aaPredicted RBP13.33□□□□□ -0.28
VTI1A-205ENST00000483122 HSPA1LP34931 641 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 TDO2P48775 406 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 SPATA1Q5VX52 437 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 XAGE2Q96GT9 111 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 ABHD10Q9NUJ1 306 aa13.33□□□□□ -0.28
VTI1A-205ENST00000483122 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms