RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 GRK4P32298 578 aa5.89□□□□□ -1.47
LAPTM4A-202ENST00000483117 CLCN7P51798 805 aa5.89□□□□□ -1.47
LAPTM4A-202ENST00000483117 FGD1P98174 961 aa5.89□□□□□ -1.47
LAPTM4A-202ENST00000483117 MEI1Q5TIA1 1274 aa5.89□□□□□ -1.47
LAPTM4A-202ENST00000483117 CDKAL1Q5VV42 579 aa5.89□□□□□ -1.47
LAPTM4A-202ENST00000483117 PATL2C9JE40 543 aaKnown RBP5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 LMNB1P20700 586 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 CAP2P40123 477 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 LIG3P49916 1009 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 EAPPQ56P03 285 aaPredicted RBP5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 SFRP5Q5T4F7 317 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 PRAMEF13Q5VWM6 474 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 LETMD1Q6P1Q0 360 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 HID1Q8IV36 788 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 MFSD2AQ8NA29 543 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 HSPA12BQ96MM6 686 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
LAPTM4A-202ENST00000483117 FAM155AB1AL88 458 aaPredicted RBP5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 GFRA2O00451 464 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 CBX7O95931 251 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 RPS26P62854 115 aaKnown RBP5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 ZNF124Q15973 351 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 AGMOQ6ZNB7 445 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 MFSD4AQ8N468 514 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 FLAD1Q8NFF5 587 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 KRTAP9-3Q9BYQ3 159 aa5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 CARS2Q9HA77 564 aaKnown RBP5.87□□□□□ -1.47
LAPTM4A-202ENST00000483117 H3BS24 57 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 CST3P01034 146 aaPredicted RBP5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 ZNF865P0CJ78 1059 aaPredicted RBP5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 TFE3P19532 575 aaPredicted RBP5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 C22orf34Q6ZV56 151 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 SND1Q7KZF4 910 aaKnown RBP eCLIP5.86□□□□□ -1.472e-34■■■■■ 82.7
LAPTM4A-202ENST00000483117 CDH24Q86UP0 819 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 TMEM40Q8WWA1 233 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 DPH2Q9BQC3 489 aaPredicted RBP5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 PARP2Q9UGN5 583 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 CTNND2Q9UQB3 1225 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 TLR6Q9Y2C9 796 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
LAPTM4A-202ENST00000483117 PGRP06401 933 aa5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 FYB2Q5VWT5 728 aa5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 MIR1-1HGQ9H1L0 117 aa5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 TJP2Q9UDY2 1190 aa5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 ST14Q9Y5Y6 855 aa5.85□□□□□ -1.47
LAPTM4A-202ENST00000483117 FARP2O94887 1054 aaPredicted RBP5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 KCNMB1Q16558 191 aa5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 ZSWIM9Q86XI8 627 aa5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 JARID2Q92833 1246 aaPredicted RBP5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 FAM161BQ96MY7 647 aa5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 LMCD1Q9NZU5 365 aa5.84□□□□□ -1.47
LAPTM4A-202ENST00000483117 ZNF503-AS2A6NEH8 195 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 F6X3S4 739 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 CTSHP09668 335 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 DAB2P98082 770 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 PSMD2Q13200 908 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 SPOCD1Q6ZMY3 1216 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 NPAS4Q8IUM7 802 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 MRPL41Q8IXM3 137 aaKnown RBP5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 UBE2FQ969M7 185 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 TMEM87BQ96K49 555 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 ZSWIM5Q9P217 1185 aa5.83□□□□□ -1.48
LAPTM4A-202ENST00000483117 LRRC10BA6NIK2 292 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 RPL6Q02878 288 aaKnown RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 TNK2Q07912 1038 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 TAF1CQ15572 869 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 MLANAQ16655 118 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 TSNAXIP1Q2TAA8 658 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 ZNF746Q6NUN9 644 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 DNAJC14Q6Y2X3 702 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 PHC3Q8NDX5 983 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 ACSF2Q96CM8 615 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 LIN37Q96GY3 246 aaPredicted RBP5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 CORINQ9Y5Q5 1042 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 TACC3Q9Y6A5 838 aa5.82□□□□□ -1.48
LAPTM4A-202ENST00000483117 WASH4PA8MWX3 477 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 CYP7A1P22680 504 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 AFMP43652 599 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 XPCQ01831 940 aaPredicted RBP5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 MESP2Q0VG99 397 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 SLC6A19Q695T7 634 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 KSR1Q8IVT5 923 aa5.81□□□□□ -1.48
LAPTM4A-202ENST00000483117 KIR3DL1P43629 444 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 TAGLNQ01995 201 aaKnown RBP5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 PDE4BQ07343 736 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 KRTAP1-1Q07627 177 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 BNC2Q6ZN30 1099 aaPredicted RBP5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 THAP5Q7Z6K1 395 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 MCATQ8IVS2 390 aaKnown RBP5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 DNAJB8Q8NHS0 232 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 KIRREL1Q96J84 757 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 NOC4LQ9BVI4 516 aaKnown RBP5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
LAPTM4A-202ENST00000483117 UPK3BL1B0FP48 263 aa5.79□□□□□ -1.48
LAPTM4A-202ENST00000483117 UPK3BL2E5RIL1 263 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms