RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 PRAMEF18Q5VWM3 479 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 MIGA2Q7L4E1 593 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 IQCA1Q86XH1 822 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
PHGDH-205ENST00000482968 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 TEPSINQ96N21 525 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 UBAC1Q9BSL1 405 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.7■□□□□ 0.42
PHGDH-205ENST00000482968 DAXXQ9UER7 740 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-205ENST00000482968 LIMCH1Q9UPQ0 1083 aa17.7■□□□□ 0.42
PHGDH-205ENST00000482968 NMT2O60551 498 aa17.69■□□□□ 0.42
PHGDH-205ENST00000482968 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
PHGDH-205ENST00000482968 SART3Q15020 963 aaKnown RBP17.69■□□□□ 0.42
PHGDH-205ENST00000482968 TMEM67Q5HYA8 995 aa17.69■□□□□ 0.42
PHGDH-205ENST00000482968 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
PHGDH-205ENST00000482968 RRAGCQ9HB90 399 aa17.69■□□□□ 0.42
PHGDH-205ENST00000482968 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
PHGDH-205ENST00000482968 WDR90Q96KV7 1748 aa17.69■□□□□ 0.42
PHGDH-205ENST00000482968 ERICH2A1L162 156 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 APOBRQ0VD83 1088 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 AGXT2Q9BYV1 514 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 ANGEL1Q9UNK9 670 aaKnown RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 MYH8P13535 1937 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 SH2B2O14492 632 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 CERKLQ49MI3 558 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 NBPF12Q5TAG4 269 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 FBXL16Q8N461 479 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 TMX3Q96JJ7 454 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 SENP2Q9HC62 589 aa17.68■□□□□ 0.42
PHGDH-205ENST00000482968 NAP1L2Q9ULW6 460 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-205ENST00000482968 TNKSO95271 1327 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 PITPNM2Q9BZ72 1349 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 AKR1B1P15121 316 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 NT5C2P49902 561 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 WTAPQ15007 396 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 TATDN1Q6P1N9 297 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 PNMA8AQ86V59 439 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-205ENST00000482968 ZNF526Q8TF50 670 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-205ENST00000482968 LY9Q9HBG7 655 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
PHGDH-205ENST00000482968 MPHOSPH10O00566 681 aaKnown RBP17.66■□□□□ 0.42
PHGDH-205ENST00000482968 VEGFAP15692 232 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-205ENST00000482968 ME3Q16798 604 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 NFXL1Q6ZNB6 911 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 SULF1Q8IWU6 871 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-205ENST00000482968 SPRYD3Q8NCJ5 442 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 NEDD1Q8NHV4 660 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 ZC3H15Q8WU90 426 aaKnown RBP17.66■□□□□ 0.42
PHGDH-205ENST00000482968 MTA3Q9BTC8 594 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 CLEC11AQ9Y240 323 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 TBC1D12O60347 775 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 LARGE1O95461 756 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 STK3Q13188 491 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 SEC23AQ15436 765 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 DLK2Q6UY11 383 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 CCDC17Q96LX7 622 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
PHGDH-205ENST00000482968 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 LIFRP42702 1097 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 KRT26Q7Z3Y9 468 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 ZSCAN31Q96LW9 406 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-205ENST00000482968 TCP11L1Q9NUJ3 509 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 PPP2R3BQ9Y5P8 575 aa17.65■□□□□ 0.42
PHGDH-205ENST00000482968 KLF18A0A0U1RQI7 1052 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 CCDC69A6NI79 296 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 GDF11O95390 407 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 POTEIP0CG38 1075 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 POTEJP0CG39 1038 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
PHGDH-205ENST00000482968 RRP1BQ14684 758 aaKnown RBP17.64■□□□□ 0.41
PHGDH-205ENST00000482968 SHROOM1Q2M3G4 852 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-205ENST00000482968 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
PHGDH-205ENST00000482968 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.64■□□□□ 0.41
PHGDH-205ENST00000482968 HSP90AA1P07900 732 aaKnown RBP17.63■□□□□ 0.41
PHGDH-205ENST00000482968 PDIA3P30101 505 aaKnown RBP17.63■□□□□ 0.41
PHGDH-205ENST00000482968 USP48Q86UV5 1035 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 SGMS1Q86VZ5 419 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 RAB11FIP4Q86YS3 637 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 NMRK2Q9NPI5 230 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 STX8Q9UNK0 236 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 EVCP57679 992 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 ABCB5Q2M3G0 1257 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 RCSD1Q6JBY9 416 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 DGKHQ86XP1 1220 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 ZNF274Q96GC6 653 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-205ENST00000482968 SLKQ9H2G2 1235 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-205ENST00000482968 SH2B1Q9NRF2 756 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-205ENST00000482968 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
PHGDH-205ENST00000482968 CCT2P78371 535 aaKnown RBP17.62■□□□□ 0.41
PHGDH-205ENST00000482968 JAG1P78504 1218 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms