RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 MPHOSPH10O00566 681 aaKnown RBP14.46□□□□□ -0.09
SDC1-206ENST00000482879 KDM4AO75164 1064 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 CELF2O95319 508 aaKnown RBP14.46□□□□□ -0.09
SDC1-206ENST00000482879 IREB2P48200 963 aaKnown RBP14.46□□□□□ -0.09
SDC1-206ENST00000482879 TFAP4Q01664 338 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 RRP1BQ14684 758 aaKnown RBP14.46□□□□□ -0.09
SDC1-206ENST00000482879 FAM47AQ5JRC9 791 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 ARMC9Q7Z3E5 817 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 KLRG1Q96E93 195 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 CCDC17Q96LX7 622 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 WRNIP1Q96S55 665 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 ZNF112Q9UJU3 913 aa14.46□□□□□ -0.09
SDC1-206ENST00000482879 ANGEL1Q9UNK9 670 aaKnown RBP14.46□□□□□ -0.09
SDC1-206ENST00000482879 CTNND1O60716 968 aaKnown RBP14.45□□□□□ -0.1
SDC1-206ENST00000482879 GDF11O95390 407 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 TSPY3P0CV98 308 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 TSPY8P0CW00 308 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 AKR1B1P15121 316 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 INPP5BP32019 993 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 CAP2P40123 477 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 MAP3K9P80192 1104 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 FSTL1Q12841 308 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 ABCB5Q2M3G0 1257 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 MOB2Q70IA6 237 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 NKX2-3Q8TAU0 364 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 CABP5Q9NP86 173 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
SDC1-206ENST00000482879 PASKQ96RG2 1323 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 HMGB1P09429 215 aaKnown RBP14.44□□□□□ -0.1
SDC1-206ENST00000482879 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
SDC1-206ENST00000482879 NT5C2P49902 561 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 BLOC1S2Q6QNY1 142 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 MB21D2Q8IYB1 491 aaPredicted RBP14.44□□□□□ -0.1
SDC1-206ENST00000482879 C2orf69Q8N8R5 385 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 NEDD1Q8NHV4 660 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 IL17RAQ96F46 866 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 TM6SF1Q9BZW5 370 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 GBA2Q9HCG7 927 aaPredicted RBP14.44□□□□□ -0.1
SDC1-206ENST00000482879 DOCK1Q14185 1865 aa14.44□□□□□ -0.1
SDC1-206ENST00000482879 OTOFQ9HC10 1997 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 PAPPA2Q9BXP8 1791 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 UBE2Q2LH0YL09 131 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 GH2P01242 217 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 CPA1P15085 419 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 MCM5P33992 734 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 FKBP1BP68106 108 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 JAG1P78504 1218 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
SDC1-206ENST00000482879 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 SHROOM1Q2M3G4 852 aaPredicted RBP14.43□□□□□ -0.1
SDC1-206ENST00000482879 CST9Q5W186 159 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 DHX32Q7L7V1 743 aaKnown RBP14.43□□□□□ -0.1
SDC1-206ENST00000482879 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.43□□□□□ -0.1
SDC1-206ENST00000482879 ZKSCAN4Q969J2 545 aaPredicted RBP14.43□□□□□ -0.1
SDC1-206ENST00000482879 KIF2CQ99661 725 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 ZSWIM6Q9HCJ5 1215 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 CYP46A1Q9Y6A2 500 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 GREB1LQ9C091 1923 aaPredicted RBP14.43□□□□□ -0.1
SDC1-206ENST00000482879 MYH4Q9Y623 1939 aa14.43□□□□□ -0.1
SDC1-206ENST00000482879 PRC1O43663 620 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 RPS6KB1P23443 525 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 ANTXR2P58335 489 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.42□□□□□ -0.1
SDC1-206ENST00000482879 TMEM179Q6ZVK1 233 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 RUFY3Q7L099 469 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 IQCA1Q86XH1 822 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 ANKRD13AQ8IZ07 590 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 SCYL3Q8IZE3 742 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 ZKSCAN3Q9BRR0 538 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 UBAC1Q9BSL1 405 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
SDC1-206ENST00000482879 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
SDC1-206ENST00000482879 PICK1Q9NRD5 415 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 GINM1Q9NU53 330 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.42□□□□□ -0.1
SDC1-206ENST00000482879 ZBTB21Q9ULJ3 1066 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 CSADQ9Y600 493 aa14.42□□□□□ -0.1
SDC1-206ENST00000482879 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
SDC1-206ENST00000482879 NMT2O60551 498 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 ASNSP08243 561 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 GUCY1A2P33402 732 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
SDC1-206ENST00000482879 SEPT2Q15019 361 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 RAB3GAP1Q15042 981 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 CCDC178Q5BJE1 867 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 NOL9Q5SY16 702 aaKnown RBP14.41□□□□□ -0.1
SDC1-206ENST00000482879 LDLRAD1Q5T700 205 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 TCEANC2Q96MN5 208 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 ZSCAN10Q96SZ4 725 aaPredicted RBP14.41□□□□□ -0.1
SDC1-206ENST00000482879 IL17RBQ9NRM6 502 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 TCP11L1Q9NUJ3 509 aa14.41□□□□□ -0.1
SDC1-206ENST00000482879 PLIN4Q96Q06 1357 aa14.4□□□□□ -0.1
SDC1-206ENST00000482879 IGKV6D-41A0A0C4DH26 115 aa14.4□□□□□ -0.1
SDC1-206ENST00000482879 ERICH2A1L162 156 aa14.4□□□□□ -0.1
SDC1-206ENST00000482879 NEK4P51957 841 aa14.4□□□□□ -0.1
SDC1-206ENST00000482879 VGLL4Q14135 290 aa14.4□□□□□ -0.1
SDC1-206ENST00000482879 SART3Q15020 963 aaKnown RBP14.4□□□□□ -0.1
SDC1-206ENST00000482879 RABEP1Q15276 862 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms