RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 ZNF827Q17R98 1081 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 VPS37DQ86XT2 251 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 TRMT44Q8IYL2 757 aaKnown RBP16.28■□□□□ 0.2
COL9A2-207ENST00000482722 SENP2Q9HC62 589 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 ABCB6Q9NP58 842 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 JRKLQ9Y4A0 524 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 RPS6KA5O75582 802 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 BMP6P22004 513 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 OLFM4Q6UX06 510 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 METTL16Q86W50 562 aaKnown RBP16.28■□□□□ 0.2
COL9A2-207ENST00000482722 TOM1O60784 492 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 NFXL1Q6ZNB6 911 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 ALG1Q9BT22 464 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 LZTFL1Q9NQ48 299 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 L1RE1Q9UN81 338 aa16.28■□□□□ 0.2
COL9A2-207ENST00000482722 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
COL9A2-207ENST00000482722 SPATA31A5Q5VU36 1347 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 SPATA31A7Q8IWB4 1347 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 A0A0U1RQJ8 604 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 B4E1Z4 1266 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 PHACTR2O75167 634 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 TBC1D10CQ8IV04 446 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 ATRIPQ8WXE1 791 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.27■□□□□ 0.2
COL9A2-207ENST00000482722 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.2
COL9A2-207ENST00000482722 RAB21Q9UL25 225 aa16.27■□□□□ 0.2
COL9A2-207ENST00000482722 IQSEC3Q9UPP2 1182 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-207ENST00000482722 USP5P45974 858 aa16.27■□□□□ 0.19
COL9A2-207ENST00000482722 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.19
COL9A2-207ENST00000482722 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.19
COL9A2-207ENST00000482722 TOMM22Q9NS69 142 aa16.27■□□□□ 0.19
COL9A2-207ENST00000482722 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 TFRCP02786 760 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 CTSWP56202 376 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 PLEKHA4Q9H4M7 779 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 CSF1RP07333 972 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 EIF5P55010 431 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 SPECC1LQ69YQ0 1117 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 KRT40Q6A162 431 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 LRRC31Q6UY01 552 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 PIH1D3Q9NQM4 214 aaKnown RBP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
COL9A2-207ENST00000482722 HPSEQ9Y251 543 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 PHLPP1O60346 1717 aa16.26■□□□□ 0.19
COL9A2-207ENST00000482722 GUCY2CP25092 1073 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 TRIM28Q13263 835 aaKnown RBP16.25■□□□□ 0.19
COL9A2-207ENST00000482722 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 DRC1Q96MC2 740 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 NBPF3Q9H094 633 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 RIPOR2Q9Y4F9 1068 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 LTBP4Q8N2S1 1624 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 SOWAHDA6NJG2 315 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 RHOXF2BP0C7M4 288 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL9A2-207ENST00000482722 GRAMD1CQ8IYS0 662 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 CCDC82Q8N4S0 544 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 RHOXF2Q9BQY4 288 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 CDC23Q9UJX2 597 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 ANGEL1Q9UNK9 670 aaKnown RBP16.25■□□□□ 0.19
COL9A2-207ENST00000482722 ZNF532Q9HCE3 1301 aa16.25■□□□□ 0.19
COL9A2-207ENST00000482722 MYO1BO43795 1136 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 ERLIN1O75477 346 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 IL6STP40189 918 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CORO7P57737 925 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 VSNL1P62760 191 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CPLX3Q8WVH0 158 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 KCNH3Q9ULD8 1083 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 ANKRD18BA2A2Z9 1011 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CCDC175P0C221 793 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 PHKA1P46020 1223 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 GRIN1Q05586 938 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CASP8Q14790 479 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CCDC102BQ68D86 513 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 CEP112Q8N8E3 955 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
COL9A2-207ENST00000482722 WWC3Q9ULE0 1092 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 DOT1LQ8TEK3 1739 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 ADD2P35612 726 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 PTPAQ15257 358 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
COL9A2-207ENST00000482722 SLC51AQ86UW1 340 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
COL9A2-207ENST00000482722 NUP98P52948 1817 aa16.23■□□□□ 0.19
COL9A2-207ENST00000482722 RRP12Q5JTH9 1297 aaKnown RBP16.23■□□□□ 0.19
COL9A2-207ENST00000482722 C3orf67Q6ZVT6 689 aa16.23■□□□□ 0.19
COL9A2-207ENST00000482722 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
COL9A2-207ENST00000482722 ATP2B1P20020 1258 aa16.23■□□□□ 0.19
COL9A2-207ENST00000482722 HSP90B2PQ58FF3 399 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms