RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 SRGAP1Q7Z6B7 1085 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 MACROD2A1Z1Q3 448 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 H3BQF6 201 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 IRS4O14654 1257 aaPredicted RBP14.41□□□□□ -0.1
VPS52-218ENST00000482399 NLRP5P59047 1200 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 TUBE1Q9UJT0 475 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 XRN1Q8IZH2 1706 aaKnown RBP14.4□□□□□ -0.1
VPS52-218ENST00000482399 MAP3K9P80192 1104 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 IFNL3Q8IZI9 196 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 NAPGQ99747 312 aaPredicted RBP14.4□□□□□ -0.1
VPS52-218ENST00000482399 AGXT2Q9BYV1 514 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 DIP2BQ9P265 1576 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 MYO1CO00159 1063 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 SRGAP2O75044 1071 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 TTC19Q6DKK2 380 aaPredicted RBP14.4□□□□□ -0.1
VPS52-218ENST00000482399 GSPT2Q8IYD1 628 aaKnown RBP14.4□□□□□ -0.1
VPS52-218ENST00000482399 TMEM87BQ96K49 555 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 MAGEC2Q9UBF1 373 aaPredicted RBP14.4□□□□□ -0.1
VPS52-218ENST00000482399 LCMT1Q9UIC8 334 aa14.4□□□□□ -0.1
VPS52-218ENST00000482399 CYP7A1P22680 504 aa14.4□□□□□ -0.11
VPS52-218ENST00000482399 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.11
VPS52-218ENST00000482399 SYMPKQ92797 1274 aaKnown RBP14.4□□□□□ -0.11
VPS52-218ENST00000482399 CENPHQ9H3R5 247 aa14.4□□□□□ -0.11
VPS52-218ENST00000482399 TRIM10Q9UDY6 481 aa14.4□□□□□ -0.11
VPS52-218ENST00000482399 CDC23Q9UJX2 597 aa14.4□□□□□ -0.11
VPS52-218ENST00000482399 ADD2P35612 726 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 PTPAQ15257 358 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 CCDC122Q5T0U0 273 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 HSD3B7Q9H2F3 369 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 HDAC6Q9UBN7 1215 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 DIP2AQ14689 1571 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 ZRANB2O95218 330 aaKnown RBP eCLIP14.39□□□□□ -0.11
VPS52-218ENST00000482399 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 PIK3AP1Q6ZUJ8 805 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 RUFY1Q96T51 708 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 PALLDQ8WX93 1383 aa14.39□□□□□ -0.11
VPS52-218ENST00000482399 CYP2D7A0A087X1C5 515 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 TRIM21P19474 475 aaKnown RBP14.38□□□□□ -0.11
VPS52-218ENST00000482399 VSNL1P62760 191 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 PNKPQ96T60 521 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 ADGRG1Q9Y653 693 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 CCDC151A5D8V7 595 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 ABL1P00519 1130 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 TCIRG1Q13488 830 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 AKNAD1Q5T1N1 836 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 ENOX1Q8TC92 643 aaKnown RBP14.38□□□□□ -0.11
VPS52-218ENST00000482399 RIN2Q8WYP3 895 aaPredicted RBP14.38□□□□□ -0.11
VPS52-218ENST00000482399 TRIM47Q96LD4 638 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 FUT8Q9BYC5 575 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 DEF6Q9H4E7 631 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 ZNHIT6Q9NWK9 470 aaKnown RBP14.38□□□□□ -0.11
VPS52-218ENST00000482399 RRP15Q9Y3B9 282 aaKnown RBP14.38□□□□□ -0.11
VPS52-218ENST00000482399 MMP1P03956 469 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 FXR1P51114 621 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS52-218ENST00000482399 PLCD1P51178 756 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 CNGA4Q8IV77 575 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 ZNF654Q8IZM8 581 aa14.38□□□□□ -0.11
VPS52-218ENST00000482399 CCDC70Q6NSX1 233 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 TEX13AQ9BXU3 409 aaPredicted RBP14.37□□□□□ -0.11
VPS52-218ENST00000482399 KRT23Q9C075 422 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 FAM204AQ9H8W3 233 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 LY9Q9HBG7 655 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 POLD4Q9HCU8 107 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 FEZ2Q9UHY8 353 aaPredicted RBP14.37□□□□□ -0.11
VPS52-218ENST00000482399 FAM208AQ9UK61 1670 aaKnown RBP14.37□□□□□ -0.11
VPS52-218ENST00000482399 DEXIO95424 95 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 STARD3NLO95772 234 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 BCAMP50895 628 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 IFIT1BQ5T764 474 aaKnown RBP14.37□□□□□ -0.11
VPS52-218ENST00000482399 FAM107BQ9H098 131 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 GPR108Q9NPR9 543 aa14.37□□□□□ -0.11
VPS52-218ENST00000482399 GNL3LQ9NVN8 582 aaKnown RBP14.37□□□□□ -0.11
VPS52-218ENST00000482399 FAM170AA1A519 330 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 CASP8Q14790 479 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 BRD3Q15059 726 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 CATIPQ7Z7H3 387 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 FANCBQ8NB91 859 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 NOA1Q8NC60 698 aaKnown RBP14.36□□□□□ -0.11
VPS52-218ENST00000482399 SEC31BQ9NQW1 1179 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 ASAP1Q9ULH1 1129 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 HPSEQ9Y251 543 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 SLC5A1P13866 664 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 PTPREP23469 700 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 ACTN2P35609 894 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 CASP7P55210 303 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 HLFQ16534 295 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 SPATA1Q5VX52 437 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 FOXR1Q6PIV2 292 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 BICDL1Q6ZP65 573 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 FCHSD1Q86WN1 690 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 MICALL1Q8N3F8 863 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 NRXN3Q9Y4C0 1643 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 H0YHG0 523 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 FOXP2O15409 715 aa14.36□□□□□ -0.11
VPS52-218ENST00000482399 ZPR1O75312 459 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms