RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 GBP6Q6ZN66 633 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
TRIM27-205ENST00000481474 NOX5Q96PH1 765 aa12.85□□□□□ -0.35
TRIM27-205ENST00000481474 EXT2Q93063 718 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 MSH6P52701 1360 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 CLRN2A0PK11 232 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 RILPL1Q5EBL4 403 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 NELFCDQ8IXH7 590 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 LBHD1Q9BQE6 289 aaPredicted RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 EFCC1Q9HA90 598 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 USP21Q9UK80 565 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 hCG_1642624A0A1W2PR95 340 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 MCM5P33992 734 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 CALCOCO2Q13137 446 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 RMND1Q9NWS8 449 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 HEXIM1O94992 359 aaKnown RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 PSMA7O14818 248 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 PHEXP78562 749 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 DTHD1Q6ZMT9 781 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 XAGE3Q8WTP9 111 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 NEUROG2Q9H2A3 272 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 THRAP3Q9Y2W1 955 aaKnown RBP12.84□□□□□ -0.35
TRIM27-205ENST00000481474 KRT2P35908 639 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 EPHB1P54762 984 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 TRAF1Q13077 416 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 CAPN10Q9HC96 672 aa12.84□□□□□ -0.35
TRIM27-205ENST00000481474 MYL3P08590 195 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 MARK3P27448 753 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 RNF219Q5W0B1 726 aaPredicted RBP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 SH2D4AQ9H788 454 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 OSTNP61366 133 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 TSC22D1Q15714 1073 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 LIN9Q5TKA1 542 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 ZNF365Q70YC5 407 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 TMEM106CQ9BVX2 250 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 DDHD2O94830 711 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 MYL1P05976 194 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 COPS6Q7L5N1 327 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 YAF2Q8IY57 180 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 RB1CC1Q8TDY2 1594 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 SYF2O95926 243 aaKnown RBP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 IFNB1P01574 187 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 KRT3P12035 628 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 ARL4DP49703 201 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 PDE4DQ08499 809 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
TRIM27-205ENST00000481474 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 ASIC3Q9UHC3 531 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 CTNND2Q9UQB3 1225 aa12.83□□□□□ -0.36
TRIM27-205ENST00000481474 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 SERPIND1P05546 499 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ADAT2Q7Z6V5 191 aaKnown RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 USP48Q86UV5 1035 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 C7orf31Q8N865 590 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 DEPTORQ8TB45 409 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ZMAT2Q96NC0 199 aaKnown RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 MTUS1Q9ULD2 1270 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 FRMPD2Q68DX3 1309 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 BUB1BO60566 1050 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 TAF5LO75529 589 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 CENPAP49450 140 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 GIMAP6Q6P9H5 292 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 GGA1Q9UJY5 639 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 CCDC94Q9BW85 323 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ZSCAN20P17040 1043 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 LIG3P49916 1009 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 CCDC121Q6ZUS5 278 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 IPO11Q9UI26 975 aaKnown RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 MAP7Q14244 749 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 PRR23CQ6ZRP0 262 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 BRF1Q92994 677 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 GNGT2O14610 69 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 TACC1O75410 805 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 KRT27Q7Z3Y8 459 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 RSAD2Q8WXG1 361 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 MRPL44Q9H9J2 332 aaKnown RBP12.82□□□□□ -0.36
TRIM27-205ENST00000481474 FBXL5Q9UKA1 691 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 SLC8A2Q9UPR5 921 aa12.82□□□□□ -0.36
TRIM27-205ENST00000481474 SOX5P35711 763 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 MMEL1Q495T6 779 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
TRIM27-205ENST00000481474 PLCB1Q9NQ66 1216 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms