RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 HMGCS2P54868 508 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 PRKCZQ05513 592 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 TTC6Q86TZ1 520 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 GTF3C2Q8WUA4 911 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 TMOD4Q9NZQ9 345 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 SERPINB13Q9UIV8 391 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 ZBTB21Q9ULJ3 1066 aa14.74□□□□□ -0.05
SQSTM1-207ENST00000481335 USP17L10C9JJH3 530 aa14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 TNPO2O14787 897 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 DYNLL1P63167 89 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 RRP1BQ14684 758 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 CCDC84Q86UT8 332 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 SIRT2Q8IXJ6 389 aa14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 COA7Q96BR5 231 aa14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 RIOK1Q9BRS2 568 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 ANTXR1Q9H6X2 564 aa14.73□□□□□ -0.05
SQSTM1-207ENST00000481335 GJB1P08034 283 aa14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 MTMR2Q13614 643 aa14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 ANKRD13CQ8N6S4 541 aa14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 MIGA1Q8NAN2 632 aa14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 MORF4L1Q9UBU8 362 aa14.72□□□□□ -0.05
SQSTM1-207ENST00000481335 MAGEB6P1A0A0J9YX57 407 aa14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 GJA8P48165 433 aa14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 FLT3LGP49771 235 aa14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 IRX3P78415 501 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 SLC9C2Q5TAH2 1124 aa14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 CRNKL1Q9BZJ0 848 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 SAP30BPQ9UHR5 308 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 CEP290O15078 2479 aa14.71□□□□□ -0.05
SQSTM1-207ENST00000481335 ADCY3O60266 1144 aa14.7□□□□□ -0.06
SQSTM1-207ENST00000481335 GDF11O95390 407 aa14.7□□□□□ -0.06
SQSTM1-207ENST00000481335 PDE6AP16499 860 aa14.7□□□□□ -0.06
SQSTM1-207ENST00000481335 C12orf42Q96LP6 360 aa14.7□□□□□ -0.06
SQSTM1-207ENST00000481335 NDUFB9Q9Y6M9 179 aa14.7□□□□□ -0.06
SQSTM1-207ENST00000481335 PLXNB2O15031 1838 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 CCL5P13501 91 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 ATP5JP18859 108 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 USP14P54578 494 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 MTFR1Q15390 333 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L2Q6R6M4 530 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 LRRCC1Q9C099 1032 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 PAG1Q9NWQ8 432 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 BIN2Q9UBW5 565 aaPredicted RBP14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 GABRQQ9UN88 632 aa14.69□□□□□ -0.06
SQSTM1-207ENST00000481335 ZNF532Q9HCE3 1301 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 TCRBV5S4A2TA0A5A2 114 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 GOLIM4O00461 696 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 GH2P01242 217 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 CERKLQ49MI3 558 aaPredicted RBP14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 SOCS4Q8WXH5 440 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 SHISA4Q96DD7 197 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 DNAJC2Q99543 621 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 HAUS7Q99871 368 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 RNF208Q9H0X6 261 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 CABP5Q9NP86 173 aa14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 BAZ2AQ9UIF9 1905 aaKnown RBP14.68□□□□□ -0.06
SQSTM1-207ENST00000481335 APBB1O00213 710 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 ECM2O94769 699 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 INHAP05111 366 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 POLR3DP05423 398 aaPredicted RBP14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 HERVK_113P62684 666 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 JAG1P78504 1218 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 GABPAQ06546 454 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 ZSCAN25Q6NSZ9 544 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 KIAA1683Q9H0B3 1180 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 ATP8A2Q9NTI2 1148 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 SWAP70Q9UH65 585 aa14.67□□□□□ -0.06
SQSTM1-207ENST00000481335 MYCP01106 439 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 HMGCRP04035 888 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 MAPK4P31152 587 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 SHMT1P34896 483 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 ADD2P35612 726 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 UBE3CQ15386 1083 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 LBX2Q6XYB7 198 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 UBE2Q1Q7Z7E8 422 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 GPRC5AQ8NFJ5 357 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 U2AF1L4Q8WU68 220 aaKnown RBP14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 FEZ1Q99689 392 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 HTATIP2Q9BUP3 242 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 DCP1AQ9NPI6 582 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 PAK6Q9NQU5 681 aaPredicted RBP14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 MCM9Q9NXL9 1143 aa14.66□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L15C9J2P7 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L13C9JLJ4 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L11C9JVI0 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L18D6R9N7 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L22D6RA61 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L17D6RBQ6 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L19D6RCP7 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 USP17L20D6RJB6 530 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 SGPL1O95470 568 aa14.65□□□□□ -0.06
SQSTM1-207ENST00000481335 XRCC5P13010 732 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms