RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 CDCP2Q5VXM1 449 aa13.33□□□□□ -0.28
CUL3-209ENST00000481135 INTS3Q68E01 1043 aaKnown RBP13.33□□□□□ -0.28
CUL3-209ENST00000481135 ATG4CQ96DT6 458 aa13.33□□□□□ -0.28
CUL3-209ENST00000481135 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
CUL3-209ENST00000481135 CNNM2Q9H8M5 875 aa13.33□□□□□ -0.28
CUL3-209ENST00000481135 ACTR10Q9NZ32 417 aa13.33□□□□□ -0.28
CUL3-209ENST00000481135 RAG1P15918 1043 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 GUCY2CP25092 1073 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 CASP7P55210 303 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 PPP2R5EQ16537 467 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 ARSHQ5FYA8 562 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 DCAF5Q96JK2 942 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 MYRFLQ96LU7 910 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 FBRSQ9HAH7 460 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 DAGLAQ9Y4D2 1042 aa13.32□□□□□ -0.28
CUL3-209ENST00000481135 KRBA1A5PL33 1030 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 CHURC1-FNTBB4DL54 471 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 BMP3P12645 472 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 NME1P15531 152 aaKnown RBP13.31□□□□□ -0.28
CUL3-209ENST00000481135 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 FAM169BQ8N8A8 192 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 LNPKQ9C0E8 428 aa13.31□□□□□ -0.28
CUL3-209ENST00000481135 DHX15O43143 795 aaKnown RBP13.3□□□□□ -0.28
CUL3-209ENST00000481135 PHACTR4Q8IZ21 702 aa13.3□□□□□ -0.28
CUL3-209ENST00000481135 FBLIM1Q8WUP2 373 aa13.3□□□□□ -0.28
CUL3-209ENST00000481135 HNRNPLLQ8WVV9 542 aaKnown RBP13.3□□□□□ -0.28
CUL3-209ENST00000481135 EZH1Q92800 747 aaPredicted RBP13.3□□□□□ -0.28
CUL3-209ENST00000481135 FOXQ1Q9C009 403 aa13.3□□□□□ -0.28
CUL3-209ENST00000481135 UPK3BL1B0FP48 263 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 UPK3BL2E5RIL1 263 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 TNFRSF10CO14798 259 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 KLF4O43474 513 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 DNAJA2O60884 412 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 LRIG2O94898 1065 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 CST3P01034 146 aaPredicted RBP13.29□□□□□ -0.28
CUL3-209ENST00000481135 MAP4P27816 1152 aaKnown RBP13.29□□□□□ -0.28
CUL3-209ENST00000481135 RAB33AQ14088 237 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 SLBPQ14493 270 aaKnown RBP eCLIP13.29□□□□□ -0.28
CUL3-209ENST00000481135 NKG7Q16617 165 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 SGO2Q562F6 1265 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 MFSD2AQ8NA29 543 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 KCNF1Q9H3M0 494 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 SEMA6CQ9H3T2 930 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 SIRPGQ9P1W8 387 aa13.29□□□□□ -0.28
CUL3-209ENST00000481135 NFICP08651 508 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 CCNFP41002 786 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 CHRNA4P43681 627 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 RUFY4Q6ZNE9 571 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 FAM20CQ8IXL6 584 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 CCDC74BQ96LY2 380 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
CUL3-209ENST00000481135 FAM95CA0A1B0GW59 222 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 C1QTNF9BB2RNN3 333 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 PRAMEF13Q5VWM6 474 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 PAOXQ6QHF9 649 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 TTC6Q86TZ1 520 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 ARMC10Q8N2F6 343 aa13.27□□□□□ -0.29
CUL3-209ENST00000481135 GATA4P43694 442 aa13.26□□□□□ -0.29
CUL3-209ENST00000481135 FXNQ16595 210 aa13.26□□□□□ -0.29
CUL3-209ENST00000481135 ARMCX6Q7L4S7 300 aa13.26□□□□□ -0.29
CUL3-209ENST00000481135 CYB5D2Q8WUJ1 264 aa13.26□□□□□ -0.29
CUL3-209ENST00000481135 A0A1W2PQH9 124 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 GBP1P32455 592 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 NFKBIBQ15653 356 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 UBE3DQ7Z6J8 389 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
CUL3-209ENST00000481135 DPH2Q9BQC3 489 aaPredicted RBP13.25□□□□□ -0.29
CUL3-209ENST00000481135 RGS13O14921 159 aa13.24□□□□□ -0.29
CUL3-209ENST00000481135 KCNMA1Q12791 1236 aa13.24□□□□□ -0.29
CUL3-209ENST00000481135 CCDC144BQ3MJ40 725 aa13.24□□□□□ -0.29
CUL3-209ENST00000481135 BEND4Q6ZU67 534 aa13.24□□□□□ -0.29
CUL3-209ENST00000481135 DHRS1Q96LJ7 313 aa13.24□□□□□ -0.29
CUL3-209ENST00000481135 LARP1BQ659C4 914 aaKnown RBP13.23□□□□□ -0.29
CUL3-209ENST00000481135 UNC5AQ6ZN44 842 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 CLEC10AQ8IUN9 316 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 MKL1Q969V6 931 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 SLC9A7Q96T83 725 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 ZSWIM4Q9H7M6 989 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
CUL3-209ENST00000481135 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
CUL3-209ENST00000481135 RASSF7Q02833 373 aa13.22□□□□□ -0.29
CUL3-209ENST00000481135 KIF2CQ99661 725 aa13.22□□□□□ -0.29
CUL3-209ENST00000481135 SSBP4Q9BWG4 385 aaPredicted RBP13.22□□□□□ -0.29
CUL3-209ENST00000481135 TNKS2Q9H2K2 1166 aa13.22□□□□□ -0.29
CUL3-209ENST00000481135 ACRP10323 421 aa13.21□□□□□ -0.29
CUL3-209ENST00000481135 SERINC3Q13530 473 aa13.21□□□□□ -0.29
CUL3-209ENST00000481135 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
CUL3-209ENST00000481135 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.29
CUL3-209ENST00000481135 TP53INP1Q96A56 240 aa13.2□□□□□ -0.3
CUL3-209ENST00000481135 FAM83CQ9BQN1 747 aa13.2□□□□□ -0.3
CUL3-209ENST00000481135 SHROOM4Q9ULL8 1493 aa13.19□□□□□ -0.3
CUL3-209ENST00000481135 K7ELQ4 463 aaPredicted RBP13.19□□□□□ -0.3
CUL3-209ENST00000481135 DDR2Q16832 855 aa13.19□□□□□ -0.3
CUL3-209ENST00000481135 BBS9Q3SYG4 887 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms