RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CYP2C8P10632 490 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 RGS19P49795 217 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 JAG1P78504 1218 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 SLFNL1Q499Z3 407 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 SH3D19Q5HYK7 790 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 TSHZ3Q63HK5 1081 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 SDR42E1Q8WUS8 393 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 MCM9Q9NXL9 1143 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 ERC2O15083 957 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 GNRH1P01148 92 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 BCRP11274 1271 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 PLCD1P51178 756 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 HMGCS2P54868 508 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 ATP8A2Q9NTI2 1148 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 PDE4DIPQ5VU43 2346 aa20.51■□□□□ 0.87
HSPG2-209ENST00000480900 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
HSPG2-209ENST00000480900 SHROOM1Q2M3G4 852 aaPredicted RBP20.5■□□□□ 0.87
HSPG2-209ENST00000480900 ARHGAP39Q9C0H5 1083 aa20.5■□□□□ 0.87
HSPG2-209ENST00000480900 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
HSPG2-209ENST00000480900 PNMA3Q9UL41 463 aa20.5■□□□□ 0.87
HSPG2-209ENST00000480900 CENPFP49454 3210 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 C19orf81C9J6K1 198 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 GLRX3O76003 335 aaKnown RBP20.49■□□□□ 0.87
HSPG2-209ENST00000480900 GH2P01242 217 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 CHGBP05060 677 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 SHMT1P34896 483 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 BACE1P56817 501 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 GABPAQ06546 454 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 PABPC4Q13310 644 aaKnown RBP eCLIP20.49■□□□□ 0.87
HSPG2-209ENST00000480900 MTMR2Q13614 643 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
HSPG2-209ENST00000480900 PRKAB2O43741 272 aa20.48■□□□□ 0.87
HSPG2-209ENST00000480900 ZFYP08048 801 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-209ENST00000480900 MX1P20591 662 aa20.48■□□□□ 0.87
HSPG2-209ENST00000480900 CERKLQ49MI3 558 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-209ENST00000480900 PI4K2BQ8TCG2 481 aa20.48■□□□□ 0.87
HSPG2-209ENST00000480900 OTUD7AQ8TE49 926 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-209ENST00000480900 SMCR8Q8TEV9 937 aaPredicted RBP20.48■□□□□ 0.87
HSPG2-209ENST00000480900 PUS7LQ9H0K6 701 aaKnown RBP20.48■□□□□ 0.87
HSPG2-209ENST00000480900 SALL3Q9BXA9 1300 aa20.48■□□□□ 0.87
HSPG2-209ENST00000480900 USP17L10C9JJH3 530 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 PSMC4P43686 418 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 PRMT2P55345 433 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 SOX10P56693 466 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 ABCB5Q2M3G0 1257 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 LRRFIP1Q32MZ4 808 aaKnown RBP20.47■□□□□ 0.87
HSPG2-209ENST00000480900 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 APPBP2Q92624 585 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 DDRGK1Q96HY6 314 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 TMOD4Q9NZQ9 345 aa20.47■□□□□ 0.87
HSPG2-209ENST00000480900 RNF113AO15541 343 aaKnown RBP20.46■□□□□ 0.87
HSPG2-209ENST00000480900 ARMC5Q96C12 935 aa20.46■□□□□ 0.87
HSPG2-209ENST00000480900 TRIM47Q96LD4 638 aa20.46■□□□□ 0.87
HSPG2-209ENST00000480900 CABP5Q9NP86 173 aa20.46■□□□□ 0.87
HSPG2-209ENST00000480900 PTCH2Q9Y6C5 1203 aa20.46■□□□□ 0.87
HSPG2-209ENST00000480900 SLC4A4Q9Y6R1 1079 aa20.46■□□□□ 0.87
HSPG2-209ENST00000480900 CYP2D6P10635 497 aa20.45■□□□□ 0.86
HSPG2-209ENST00000480900 CTGFP29279 349 aa20.45■□□□□ 0.86
HSPG2-209ENST00000480900 EVX2Q03828 476 aa20.45■□□□□ 0.86
HSPG2-209ENST00000480900 AMOTL1Q8IY63 956 aa20.45■□□□□ 0.86
HSPG2-209ENST00000480900 RWDD1Q9H446 243 aaPredicted RBP20.45■□□□□ 0.86
HSPG2-209ENST00000480900 SWAP70Q9UH65 585 aa20.45■□□□□ 0.86
HSPG2-209ENST00000480900 OSBPP22059 807 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 HOXD10P28358 340 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 HOXA7P31268 230 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-209ENST00000480900 GCLCP48506 637 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-209ENST00000480900 FCGRTP55899 365 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 MLLT1Q03111 559 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-209ENST00000480900 FAM110CQ1W6H9 321 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 C12orf60Q5U649 245 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 USP17L2Q6R6M4 530 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 OSBP2Q969R2 916 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 STRBPQ96SI9 672 aaKnown RBP20.44■□□□□ 0.86
HSPG2-209ENST00000480900 ASCC2Q9H1I8 757 aaPredicted RBP20.44■□□□□ 0.86
HSPG2-209ENST00000480900 SRRDQ9UH36 339 aa20.44■□□□□ 0.86
HSPG2-209ENST00000480900 USP17L12C9JPN9 530 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 USP17L21D6R901 530 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 FMNL1O95466 1100 aaPredicted RBP20.43■□□□□ 0.86
HSPG2-209ENST00000480900 RAB3GAP1Q15042 981 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 SLC9C1Q4G0N8 1177 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 FEZ1Q99689 392 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 STAP2Q9UGK3 403 aa20.43■□□□□ 0.86
HSPG2-209ENST00000480900 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
HSPG2-209ENST00000480900 GUCY1A2P33402 732 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 IRX3P78415 501 aaPredicted RBP20.42■□□□□ 0.86
HSPG2-209ENST00000480900 GIMAP6Q6P9H5 292 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 SMC5Q8IY18 1101 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 ANKRD13CQ8N6S4 541 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 SLC44A5Q8NCS7 719 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 DYNLL2Q96FJ2 89 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 C12orf42Q96LP6 360 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 KIAA1683Q9H0B3 1180 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 EMILIN3Q9NT22 766 aa20.42■□□□□ 0.86
HSPG2-209ENST00000480900 ECM2O94769 699 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-209ENST00000480900 USP14P54578 494 aa20.41■□□□□ 0.86
HSPG2-209ENST00000480900 SEPT2Q15019 361 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms