RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 SBK1Q52WX2 424 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 ENAHQ8N8S7 591 aaPredicted RBP19.4■□□□□ 0.7
SH3D21-203ENST00000480549 ZSCAN10Q96SZ4 725 aaPredicted RBP19.4■□□□□ 0.7
SH3D21-203ENST00000480549 CD209Q9NNX6 404 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 CLIC4Q9Y696 253 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 NAV1Q8NEY1 1877 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 PRDM1O75626 825 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
SH3D21-203ENST00000480549 SLC26A6Q9BXS9 759 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 POLR3EQ9NVU0 708 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 USP25Q9UHP3 1055 aa19.4■□□□□ 0.7
SH3D21-203ENST00000480549 TNS1Q9HBL0 1735 aaKnown RBP19.39■□□□□ 0.7
SH3D21-203ENST00000480549 IL1R1P14778 569 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 SSRP1Q08945 709 aaKnown RBP19.39■□□□□ 0.69
SH3D21-203ENST00000480549 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 TNMDQ9H2S6 317 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 ARPP21Q9UBL0 812 aaPredicted RBP19.39■□□□□ 0.69
SH3D21-203ENST00000480549 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 MKRN1Q9UHC7 482 aaKnown RBP19.39■□□□□ 0.69
SH3D21-203ENST00000480549 ORC4O43929 436 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 CYP2D6P10635 497 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 COL11A2P13942 1736 aaPredicted RBP19.39■□□□□ 0.69
SH3D21-203ENST00000480549 UVSSAQ2YD98 709 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 CALCOCO1Q9P1Z2 691 aa19.39■□□□□ 0.69
SH3D21-203ENST00000480549 CCAR1Q8IX12 1150 aaKnown RBP19.38■□□□□ 0.69
SH3D21-203ENST00000480549 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
SH3D21-203ENST00000480549 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
SH3D21-203ENST00000480549 GUCY1A2P33402 732 aa19.38■□□□□ 0.69
SH3D21-203ENST00000480549 DIXDC1Q155Q3 683 aa19.38■□□□□ 0.69
SH3D21-203ENST00000480549 PCDHA7Q9UN72 937 aa19.38■□□□□ 0.69
SH3D21-203ENST00000480549 YEATS4O95619 227 aa19.37■□□□□ 0.69
SH3D21-203ENST00000480549 APBA3O96018 575 aa19.37■□□□□ 0.69
SH3D21-203ENST00000480549 CCDC192P0DO97 292 aa19.37■□□□□ 0.69
SH3D21-203ENST00000480549 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
SH3D21-203ENST00000480549 PLCB2Q00722 1185 aa19.37■□□□□ 0.69
SH3D21-203ENST00000480549 CRACR2BQ8N4Y2 399 aaPredicted RBP19.37■□□□□ 0.69
SH3D21-203ENST00000480549 ENGASEQ8NFI3 743 aa19.37■□□□□ 0.69
SH3D21-203ENST00000480549 DDX60LQ5H9U9 1706 aaKnown RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 TULP2O00295 520 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 ME1P48163 572 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 NCBP1Q09161 790 aaKnown RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 CKAP2LQ8IYA6 745 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 SH3RF3Q8TEJ3 882 aaPredicted RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 TNNT3P45378 269 aaPredicted RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 PPP4CP60510 307 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 GSTO1P78417 241 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 NLGN1Q8N2Q7 840 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 CCDC196A0A1B0GTZ2 297 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 USP17L8P0C7I0 530 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 MRVI1Q9Y6F6 885 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 RGPD3A6NKT7 1758 aaPredicted RBP19.36■□□□□ 0.69
SH3D21-203ENST00000480549 RGPD4Q7Z3J3 1758 aa19.36■□□□□ 0.69
SH3D21-203ENST00000480549 MROH7-TTC4A0A0A0MT08 1334 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 TYRO3Q06418 890 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 ADALQ6DHV7 355 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 IQCA1Q86XH1 822 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 WASF1Q92558 559 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 DDX41Q9UJV9 622 aaKnown RBP19.35■□□□□ 0.69
SH3D21-203ENST00000480549 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
SH3D21-203ENST00000480549 IFIT1BQ5T764 474 aaKnown RBP19.35■□□□□ 0.69
SH3D21-203ENST00000480549 ANO1Q5XXA6 986 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 SP8Q8IXZ3 490 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 KCNG4Q8TDN1 519 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 RTFDC1Q9BY42 306 aaPredicted RBP19.35■□□□□ 0.69
SH3D21-203ENST00000480549 MCM9Q9NXL9 1143 aa19.35■□□□□ 0.69
SH3D21-203ENST00000480549 NAA30Q147X3 362 aaPredicted RBP19.34■□□□□ 0.69
SH3D21-203ENST00000480549 STK38Q15208 465 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 A0A1W2PQ27 194 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 A0A1W2PQ64 194 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 A0A1W2PQD8 194 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 ADCY5O95622 1261 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 TRIM29Q14134 588 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 PPP2R5BQ15173 497 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 TRIM22Q8IYM9 498 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
SH3D21-203ENST00000480549 ROBO3Q96MS0 1386 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 SPTLC2O15270 562 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 CTIFO43310 598 aaKnown RBP19.34■□□□□ 0.69
SH3D21-203ENST00000480549 DEXIO95424 95 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 SRGNP10124 158 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 TROAPQ12815 778 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 C12orf60Q5U649 245 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 FSIP1Q8NA03 581 aa19.34■□□□□ 0.69
SH3D21-203ENST00000480549 SLC3A2P08195 630 aaKnown RBP19.33■□□□□ 0.69
SH3D21-203ENST00000480549 FAM160A1Q05DH4 1040 aa19.33■□□□□ 0.69
SH3D21-203ENST00000480549 FUT2Q10981 343 aa19.33■□□□□ 0.69
SH3D21-203ENST00000480549 CCDC82Q8N4S0 544 aa19.33■□□□□ 0.69
SH3D21-203ENST00000480549 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.69
SH3D21-203ENST00000480549 NMT2O60551 498 aa19.33■□□□□ 0.68
SH3D21-203ENST00000480549 MMP1P03956 469 aa19.33■□□□□ 0.68
SH3D21-203ENST00000480549 FAM47AQ5JRC9 791 aa19.33■□□□□ 0.68
SH3D21-203ENST00000480549 CCDC73Q6ZRK6 1079 aa19.33■□□□□ 0.68
SH3D21-203ENST00000480549 TAOK2Q9UL54 1235 aa19.33■□□□□ 0.68
SH3D21-203ENST00000480549 FOCADQ5VW36 1801 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms