RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 POLD1P28340 1107 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ARID4AP29374 1257 aaPredicted RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 TBX4P57082 545 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 RPUSD2Q8IZ73 545 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 GOLGA6L1Q8N7Z2 621 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ZSCAN12O43309 604 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 TOP1P11387 765 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 NOP2P46087 812 aaKnown RBP11.58□□□□□ -0.56
COMMD4-203ENST00000480484 CASP7P55210 303 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 C4orf46Q504U0 113 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 NEUROD6Q96NK8 337 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 UBXN6Q9BZV1 441 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 STRN4Q9NRL3 753 aa11.58□□□□□ -0.56
COMMD4-203ENST00000480484 ATRNO75882 1429 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 ACTN2P35609 894 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 LONRF2Q1L5Z9 754 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-203ENST00000480484 FUT8Q9BYC5 575 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 PDE11AQ9HCR9 933 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 COPRSQ9NQ92 184 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 FOXN1O15353 648 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 COBLO75128 1261 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 KARSQ15046 597 aaKnown RBP11.57□□□□□ -0.56
COMMD4-203ENST00000480484 EXOC4Q96A65 974 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 ALDH8A1Q9H2A2 487 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-203ENST00000480484 SENP2Q9HC62 589 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 PPP2R2CQ9Y2T4 447 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 UBR2Q8IWV8 1755 aa11.57□□□□□ -0.56
COMMD4-203ENST00000480484 VWA3AA6NCI4 1184 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 PHACTR2O75167 634 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 KCNJ6P48051 423 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 FOXR1Q6PIV2 292 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 ZCRB1Q8TBF4 217 aaKnown RBP11.56□□□□□ -0.56
COMMD4-203ENST00000480484 RPS6KC1Q96S38 1066 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
COMMD4-203ENST00000480484 PPP1R12CQ9BZL4 782 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 JCADQ9P266 1359 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 NCAPHQ15003 741 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 PLBD2Q8NHP8 589 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 NLRP12P59046 1061 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 FOXO4P98177 505 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 RABL6Q3YEC7 729 aaPredicted RBP11.56□□□□□ -0.56
COMMD4-203ENST00000480484 ADALQ6DHV7 355 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 SMARCC2Q8TAQ2 1214 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 PIK3R5Q8WYR1 880 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 GOLGA1Q92805 767 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 DHX58Q96C10 678 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
COMMD4-203ENST00000480484 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
COMMD4-203ENST00000480484 PUF60Q9UHX1 559 aaKnown RBP11.56□□□□□ -0.56
COMMD4-203ENST00000480484 ZNF202O95125 648 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 WWC2Q6AWC2 1192 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 CCDC12Q8WUD4 166 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-203ENST00000480484 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 DESI2Q9BSY9 194 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
COMMD4-203ENST00000480484 PFKFB2O60825 505 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 MARSP56192 900 aaKnown RBP11.55□□□□□ -0.56
COMMD4-203ENST00000480484 LRRC24Q50LG9 513 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 ICE2Q659A1 982 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 GET4Q7L5D6 327 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-203ENST00000480484 CLIC6Q96NY7 704 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 IRF2BPLQ9H1B7 796 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 HSD3B7Q9H2F3 369 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 PLEKHA4Q9H4M7 779 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
COMMD4-203ENST00000480484 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
COMMD4-203ENST00000480484 N4BP1O75113 896 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 HDLBPQ00341 1268 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 DHX8Q14562 1220 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 TTC31Q49AM3 519 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ATG3Q9NT62 314 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 M0R2C6 588 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ATP5JP18859 108 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 CDC27P30260 824 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 MAP3K9P80192 1104 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 TOGARAM2Q6ZUX3 1019 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 SUGCTQ9HAC7 445 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 PRKAG2Q9UGJ0 569 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 MRFAP1Q9Y605 127 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 MRPL42Q9Y6G3 142 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 A0A1B0GUL7 405 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 SPTLC2O15270 562 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 CBFA2T2O43439 604 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ADKP55263 362 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 BIRC2Q13490 618 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ZNF827Q17R98 1081 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 PLEKHG6Q3KR16 790 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 TSGA10IPQ3SY00 556 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ARMCX6Q7L4S7 300 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 FMNL3Q8IVF7 1028 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 LLPHQ9BRT6 129 aaKnown RBP11.54□□□□□ -0.56
COMMD4-203ENST00000480484 MYL10Q9BUA6 226 aa11.54□□□□□ -0.56
COMMD4-203ENST00000480484 ARHGAP6O43182 974 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms