RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ANGEL1Q9UNK9 670 aaKnown RBP14.62□□□□□ -0.07
TRA2B-212ENST00000480461 COL2A1P02458 1487 aaPredicted RBP14.62□□□□□ -0.07
TRA2B-212ENST00000480461 EN2P19622 333 aaPredicted RBP14.61□□□□□ -0.07
TRA2B-212ENST00000480461 INPP5BP32019 993 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 SLC44A5Q8NCS7 719 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 RUFY2Q8WXA3 655 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
TRA2B-212ENST00000480461 CLMNQ96JQ2 1002 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 LSG1Q9H089 658 aaKnown RBP14.61□□□□□ -0.07
TRA2B-212ENST00000480461 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 COLQQ9Y215 455 aaPredicted RBP14.61□□□□□ -0.07
TRA2B-212ENST00000480461 PTPN22Q9Y2R2 807 aa14.61□□□□□ -0.07
TRA2B-212ENST00000480461 FOCADQ5VW36 1801 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 MANSC4A6NHS7 340 aaPredicted RBP14.6□□□□□ -0.07
TRA2B-212ENST00000480461 MINDY4BA8MYZ0 360 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 IGF2BP3O00425 579 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRA2B-212ENST00000480461 SHMT1P34896 483 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 TTC6Q86TZ1 520 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 STK11IPQ8N1F8 1099 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRA2B-212ENST00000480461 CD99L2Q8TCZ2 262 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 DSCC1Q9BVC3 393 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 EHD4Q9H223 541 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRA2B-212ENST00000480461 SERPINB13Q9UIV8 391 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 AK9Q5TCS8 1911 aa14.6□□□□□ -0.07
TRA2B-212ENST00000480461 PPP1R12BO60237 982 aaPredicted RBP14.59□□□□□ -0.07
TRA2B-212ENST00000480461 TDO2P48775 406 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 TATDN1Q6P1N9 297 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 ERO1AQ96HE7 468 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 ZNF341Q9BYN7 854 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 NACAP1Q9BZK3 213 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 NAPBQ9H115 298 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.59□□□□□ -0.07
TRA2B-212ENST00000480461 TAF6LQ9Y6J9 622 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 RAD50Q92878 1312 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 SIPA1L1O43166 1804 aa14.59□□□□□ -0.07
TRA2B-212ENST00000480461 DDX60LQ5H9U9 1706 aaKnown RBP14.58□□□□□ -0.07
TRA2B-212ENST00000480461 SEC24BO95487 1268 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 HLA-DOAP06340 250 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 ZBTB48P10074 688 aaPredicted RBP14.58□□□□□ -0.08
TRA2B-212ENST00000480461 CDK8P49336 464 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.08
TRA2B-212ENST00000480461 INHBEP58166 350 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 CAP1Q01518 475 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 PPARAQ07869 468 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 DCAF15Q66K64 600 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 CNKSR2Q8WXI2 1034 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 WRNIP1Q96S55 665 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 ARPP21Q9UBL0 812 aaPredicted RBP14.58□□□□□ -0.08
TRA2B-212ENST00000480461 HERC5Q9UII4 1024 aaKnown RBP14.58□□□□□ -0.08
TRA2B-212ENST00000480461 ANAPC4Q9UJX5 808 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 TRIOBPQ9H2D6 2365 aa14.58□□□□□ -0.08
TRA2B-212ENST00000480461 BAZ2AQ9UIF9 1905 aaKnown RBP14.57□□□□□ -0.08
TRA2B-212ENST00000480461 HAND2P61296 217 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 VGLL4Q14135 290 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 CRACR2BQ8N4Y2 399 aaPredicted RBP14.57□□□□□ -0.08
TRA2B-212ENST00000480461 HOOK2Q96ED9 719 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 DDRGK1Q96HY6 314 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
TRA2B-212ENST00000480461 MYH1P12882 1939 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 CEP290O15078 2479 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 FGRP09769 529 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 GJA5P36382 358 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 CAP2P40123 477 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 IREB2P48200 963 aaKnown RBP14.56□□□□□ -0.08
TRA2B-212ENST00000480461 CRHR2Q13324 411 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 NECTIN1Q15223 517 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 C8orf34Q49A92 452 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
TRA2B-212ENST00000480461 ZNF333Q96JL9 665 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.56□□□□□ -0.08
TRA2B-212ENST00000480461 EFCC1Q9HA90 598 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.56□□□□□ -0.08
TRA2B-212ENST00000480461 RBM8AQ9Y5S9 174 aaKnown RBP14.56□□□□□ -0.08
TRA2B-212ENST00000480461 ZMYM6O95789 1325 aa14.56□□□□□ -0.08
TRA2B-212ENST00000480461 RANBP2P49792 3224 aaKnown RBP14.55□□□□□ -0.08
TRA2B-212ENST00000480461 CTNND1O60716 968 aaKnown RBP14.55□□□□□ -0.08
TRA2B-212ENST00000480461 PRDM1O75626 825 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 GDF11O95390 407 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 RASA1P20936 1047 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 GUCY1A2P33402 732 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 COL9A3Q14050 684 aaPredicted RBP14.55□□□□□ -0.08
TRA2B-212ENST00000480461 SIAH1Q8IUQ4 282 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 TBC1D10CQ8IV04 446 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 ANKRD13AQ8IZ07 590 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 SLC10A4Q96EP9 437 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 ELP3Q9H9T3 547 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
TRA2B-212ENST00000480461 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRA2B-212ENST00000480461 CYP21A2P08686 494 aa14.54□□□□□ -0.08
TRA2B-212ENST00000480461 AKR1B1P15121 316 aa14.54□□□□□ -0.08
TRA2B-212ENST00000480461 CERKLQ49MI3 558 aaPredicted RBP14.54□□□□□ -0.08
TRA2B-212ENST00000480461 NOL9Q5SY16 702 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms