RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 HACL1Q9UJ83 578 aa14.8□□□□□ -0.04
SIK3-209ENST00000480222 IFIT3O14879 490 aaKnown RBP14.79□□□□□ -0.04
SIK3-209ENST00000480222 TNKSO95271 1327 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 TSPY3P0CV98 308 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 TSPY8P0CW00 308 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 HSPA6P17066 643 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 RASA1P20936 1047 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 RCAN1P53805 252 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 USP50Q70EL3 339 aaPredicted RBP14.79□□□□□ -0.04
SIK3-209ENST00000480222 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 TMTC2Q8N394 836 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 CHMP4CQ96CF2 233 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 CCDC17Q96LX7 622 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 ZSCAN10Q96SZ4 725 aaPredicted RBP14.79□□□□□ -0.04
SIK3-209ENST00000480222 LRRC2Q9BYS8 371 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 INCENPQ9NQS7 918 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 TCP11L1Q9NUJ3 509 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 GGA3Q9NZ52 723 aa14.79□□□□□ -0.04
SIK3-209ENST00000480222 NID2Q14112 1375 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 TBC1D12O60347 775 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 HSP90AA1P07900 732 aaKnown RBP14.78□□□□□ -0.04
SIK3-209ENST00000480222 SHMT1P34896 483 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 CUL4AQ13619 759 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 WTAPQ15007 396 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 ANGEL2Q5VTE6 544 aaKnown RBP14.78□□□□□ -0.04
SIK3-209ENST00000480222 NOL8Q76FK4 1167 aaKnown RBP14.78□□□□□ -0.04
SIK3-209ENST00000480222 IGDCC4Q8TDY8 1250 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 HOOK2Q96ED9 719 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 ZNF274Q96GC6 653 aaPredicted RBP14.78□□□□□ -0.04
SIK3-209ENST00000480222 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SIK3-209ENST00000480222 DNAJC18Q9H819 358 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 LY9Q9HBG7 655 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 TPCN1Q9ULQ1 816 aa14.78□□□□□ -0.04
SIK3-209ENST00000480222 EPHX2P34913 555 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 TFAP4Q01664 338 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 RASA3Q14644 834 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 SEC23AQ15436 765 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 TATDN1Q6P1N9 297 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 DGKHQ86XP1 1220 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 NEDD1Q8NHV4 660 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 NKX2-3Q8TAU0 364 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 ZC3H15Q8WU90 426 aaKnown RBP14.77□□□□□ -0.05
SIK3-209ENST00000480222 TMEM39BQ9GZU3 492 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 PGAP2Q9UHJ9 254 aa14.77□□□□□ -0.05
SIK3-209ENST00000480222 KLF18A0A0U1RQI7 1052 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 CCDC69A6NI79 296 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 GOLGA8BA8MQT2 603 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
SIK3-209ENST00000480222 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 ME3Q16798 604 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 FAM47AQ5JRC9 791 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 IFIT1BQ5T764 474 aaKnown RBP14.76□□□□□ -0.05
SIK3-209ENST00000480222 ENAHQ8N8S7 591 aaPredicted RBP14.76□□□□□ -0.05
SIK3-209ENST00000480222 GTF3C6Q969F1 213 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 DEFB129Q9H1M3 183 aa14.76□□□□□ -0.05
SIK3-209ENST00000480222 ASTN2O75129 1339 aaPredicted RBP14.75□□□□□ -0.05
SIK3-209ENST00000480222 PFKFB2O60825 505 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 MAP3K10Q02779 954 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 SYNE3Q6ZMZ3 975 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 NFXL1Q6ZNB6 911 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 PNMA8AQ86V59 439 aaPredicted RBP14.75□□□□□ -0.05
SIK3-209ENST00000480222 ANKS1AQ92625 1134 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 TEPSINQ96N21 525 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 ZKSCAN3Q9BRR0 538 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 SLKQ9H2G2 1235 aaPredicted RBP14.75□□□□□ -0.05
SIK3-209ENST00000480222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.75□□□□□ -0.05
SIK3-209ENST00000480222 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.75□□□□□ -0.05
SIK3-209ENST00000480222 SLC12A7Q9Y666 1083 aa14.75□□□□□ -0.05
SIK3-209ENST00000480222 ATAD5Q96QE3 1844 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 IGKV6D-41A0A0C4DH26 115 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 KIF3CO14782 793 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 DHX16O60231 1041 aaKnown RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 DDAH1O94760 285 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 LARGE1O95461 756 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 AKR1B1P15121 316 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 PDIA3P30101 505 aaKnown RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 NOVP48745 357 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 CERKLQ49MI3 558 aaPredicted RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 DCAF15Q66K64 600 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 TMEM179Q6ZVK1 233 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 TAF1DQ9H5J8 278 aaPredicted RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 GPHNQ9NQX3 736 aaPredicted RBP14.74□□□□□ -0.05
SIK3-209ENST00000480222 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
SIK3-209ENST00000480222 ZBTB43O43298 467 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 CALM1P0DP23 149 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 CALM2P0DP24 149 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 CALM3P0DP25 149 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 SLC4A3P48751 1232 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 PPP2R5BQ15173 497 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 CATIPQ7Z7H3 387 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 SULF1Q8IWU6 871 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
SIK3-209ENST00000480222 LLPHQ9BRT6 129 aaKnown RBP14.73□□□□□ -0.05
SIK3-209ENST00000480222 IL17RBQ9NRM6 502 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 GINM1Q9NU53 330 aa14.73□□□□□ -0.05
SIK3-209ENST00000480222 BRPF3Q9ULD4 1205 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms