RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SELENOSQ9BQE4 189 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 TYW1Q9NV66 732 aaKnown RBP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PPP2R2CQ9Y2T4 447 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 PRDM2Q13029 1718 aa6.84□□□□□ -1.31
PRPF4B-205ENST00000480058 URB2Q14146 1524 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM83GA6ND36 823 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 N4BP1O75113 896 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 TNFAIP3P21580 790 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 GLE1Q53GS7 698 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 TNNI3KQ59H18 835 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC170Q8IYT3 715 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 RGS22Q8NE09 1264 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 IFIH1Q9BYX4 1025 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 DDX41Q9UJV9 622 aaKnown RBP6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 FPGT-TNNI3KV9GXZ4 949 aa6.84□□□□□ -1.32
PRPF4B-205ENST00000480058 AATKQ6ZMQ8 1374 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 PABPN1LA6NDY0 278 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM13AO94988 1023 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 IL13P35225 146 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF131P52739 623 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 RNF10Q8N5U6 811 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SPATS2LQ9NUQ6 558 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 TMOD4Q9NZQ9 345 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 FRMD4BQ9Y2L6 1034 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SH3TC1Q8TE82 1336 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 H0YCG3 227 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 KLHL30Q0D2K2 578 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 C16orf71Q8IYS4 520 aaPredicted RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 DRC1Q96MC2 740 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SCLT1Q96NL6 688 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 CAPS2Q9BXY5 557 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 EPN1Q9Y6I3 576 aaPredicted RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 PTPRTO14522 1441 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 PPP6R2O75170 966 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 GMNNO75496 209 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 BCRP11274 1271 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 PDE4DQ08499 809 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 AP1ARQ63HQ0 302 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SAMD1Q6SPF0 538 aaPredicted RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 NYXQ9GZU5 481 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.83□□□□□ -1.321e-8■■■■□ 25.8
PRPF4B-205ENST00000480058 PA2G4Q9UQ80 394 aaKnown RBP6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 FANCAO15360 1455 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 A2MP01023 1474 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 ABCC2Q92887 1545 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 CHUKO15111 745 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SPOPO43791 374 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 RCAN1P53805 252 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 LMNB2Q03252 620 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 AOC3Q16853 763 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 VPS52Q8N1B4 723 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 TRIM35Q9UPQ4 493 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 SSX2IPQ9Y2D8 614 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 ASXL2Q76L83 1435 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 STX17P56962 302 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 LONRF2Q1L5Z9 754 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 NOSTRINQ8IVI9 506 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 GRK7Q8WTQ7 553 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 EDEM3Q9BZQ6 932 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 LRWD1Q9UFC0 647 aa6.83□□□□□ -1.32
PRPF4B-205ENST00000480058 GOLGA8QA0A0J9YX86 632 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 GOLGA8OA6NCC3 632 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 GOLGA8NF8WBI6 632 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 CCDC188H7C350 402 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 NBPF10Q6P3W6 841 aaKnown RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 MMS22LQ6ZRQ5 1243 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 GAS2L3Q86XJ1 694 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 WHAMMQ8TF30 809 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 PHACTR3Q96KR7 559 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 PFDN4Q9NQP4 134 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 MAGEB6P1A0A0J9YX57 407 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 RGS16O15492 202 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SUN1O94901 812 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 C10orf76Q5T2E6 689 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 PEX26Q7Z412 305 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ZNF713Q8N859 430 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 AK8Q96MA6 479 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 EYA1Q99502 592 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SPINK5Q9NQ38 1064 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP2C2O75185 946 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 TERF2Q15554 542 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SFMBT2Q5VUG0 894 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 RUBCNQ92622 972 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ATP2A3Q93084 1043 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 JRKLQ9Y4A0 524 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 FAM169AQ9Y6X4 670 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 MAST3O60307 1309 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 FOXO3O43524 673 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 CALUO43852 315 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 STAT1P42224 750 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 ZBTB17Q13105 803 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SEPT2Q15019 361 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 HHATQ5VTY9 493 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 SMC1BQ8NDV3 1235 aa6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 DHTKD1Q96HY7 919 aaPredicted RBP6.82□□□□□ -1.32
PRPF4B-205ENST00000480058 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms