RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 ILDR1Q86SU0 546 aaPredicted RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 ZDHHC15Q96MV8 337 aa16.8■□□□□ 0.28
CLDN18-203ENST00000479660 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
CLDN18-203ENST00000479660 TSPY3P0CV98 308 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 TSPY8P0CW00 308 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 CDK8P49336 464 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLDN18-203ENST00000479660 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
CLDN18-203ENST00000479660 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 CAVIN1Q6NZI2 390 aaKnown RBP16.79■□□□□ 0.28
CLDN18-203ENST00000479660 C16orf86Q6ZW13 317 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 LARGE2Q8N3Y3 721 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 ALG1Q9BT22 464 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 SLC26A6Q9BXS9 759 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 CALM1P0DP23 149 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 CALM2P0DP24 149 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 CALM3P0DP25 149 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 TROAPQ12815 778 aa16.79■□□□□ 0.28
CLDN18-203ENST00000479660 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLDN18-203ENST00000479660 DDX4Q9NQI0 724 aaKnown RBP16.79■□□□□ 0.28
CLDN18-203ENST00000479660 MYH1P12882 1939 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 FMNL1O95466 1100 aaPredicted RBP16.78■□□□□ 0.28
CLDN18-203ENST00000479660 RASA1P20936 1047 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
CLDN18-203ENST00000479660 TTC6Q86TZ1 520 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 TRIM22Q8IYM9 498 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 CCDC82Q8N4S0 544 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 AIFM3Q96NN9 605 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
CLDN18-203ENST00000479660 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 GJB4Q9NTQ9 266 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 TFIP11Q9UBB9 837 aaKnown RBP16.78■□□□□ 0.28
CLDN18-203ENST00000479660 STK36Q9NRP7 1315 aa16.78■□□□□ 0.28
CLDN18-203ENST00000479660 DDAH1O94760 285 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 UBE2HP62256 183 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 CCDC178Q5BJE1 867 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 DGKHQ86XP1 1220 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.28
CLDN18-203ENST00000479660 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 VPS33BQ9H267 617 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 TCP11L1Q9NUJ3 509 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.28
CLDN18-203ENST00000479660 FOCADQ5VW36 1801 aa16.77■□□□□ 0.27
CLDN18-203ENST00000479660 DDX60LQ5H9U9 1706 aaKnown RBP16.77■□□□□ 0.27
CLDN18-203ENST00000479660 RCSD1Q6JBY9 416 aa16.77■□□□□ 0.27
CLDN18-203ENST00000479660 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.27
CLDN18-203ENST00000479660 WASF1Q92558 559 aa16.77■□□□□ 0.27
CLDN18-203ENST00000479660 RBM28Q9NW13 759 aaKnown RBP16.77■□□□□ 0.27
CLDN18-203ENST00000479660 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.27
CLDN18-203ENST00000479660 NBPF11Q86T75 865 aa16.76■□□□□ 0.27
CLDN18-203ENST00000479660 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
CLDN18-203ENST00000479660 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
CLDN18-203ENST00000479660 KAT14Q9H8E8 782 aa16.76■□□□□ 0.27
CLDN18-203ENST00000479660 CFAP45Q9UL16 551 aa16.76■□□□□ 0.27
CLDN18-203ENST00000479660 ADAMTSL1Q8N6G6 1762 aa16.76■□□□□ 0.27
CLDN18-203ENST00000479660 UBE2Q2LH0YL09 131 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 NFIAQ12857 509 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 ANKS1AQ92625 1134 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 SPATA32Q96LK8 384 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 RBM27Q9P2N5 1060 aaKnown RBP16.75■□□□□ 0.27
CLDN18-203ENST00000479660 ELP1O95163 1332 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 PSDA5PKW4 1024 aaPredicted RBP16.75■□□□□ 0.27
CLDN18-203ENST00000479660 RAD17O75943 681 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 DEXIO95424 95 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 TRIM29Q14134 588 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 CTCFLQ8NI51 663 aaPredicted RBP16.75■□□□□ 0.27
CLDN18-203ENST00000479660 SGIP1Q9BQI5 828 aa16.75■□□□□ 0.27
CLDN18-203ENST00000479660 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
CLDN18-203ENST00000479660 GUCY1A2P33402 732 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 GABPAQ06546 454 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 KRT40Q6A162 431 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 LEO1Q8WVC0 666 aaPredicted RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 MYO3BQ8WXR4 1341 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 PSMD14O00487 310 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 VIL1P09327 827 aaKnown RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 CACNB3P54284 484 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 ATL3Q6DD88 541 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 NIM1KQ8IY84 436 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 PNMA1Q8ND90 353 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 ZNF396Q96N95 335 aaPredicted RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 RNF26Q9BY78 433 aaPredicted RBP16.74■□□□□ 0.27
CLDN18-203ENST00000479660 TMEM63CQ9P1W3 806 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 CD2APQ9Y5K6 639 aa16.74■□□□□ 0.27
CLDN18-203ENST00000479660 PLEKHA8P1O95397 391 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
CLDN18-203ENST00000479660 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
CLDN18-203ENST00000479660 ZSCAN23Q3MJ62 389 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 ZNRF3Q9ULT6 936 aa16.73■□□□□ 0.27
CLDN18-203ENST00000479660 FUT2Q10981 343 aa16.72■□□□□ 0.27
CLDN18-203ENST00000479660 TCP10Q12799 353 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms