RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 ADD2P35612 726 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 UBE3CQ15386 1083 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 CERKLQ49MI3 558 aaPredicted RBP18.19■□□□□ 0.5
PRKN-207ENST00000479615 TREML2Q5T2D2 321 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 CCDC84Q86UT8 332 aaPredicted RBP18.19■□□□□ 0.5
PRKN-207ENST00000479615 DDRGK1Q96HY6 314 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 ATP8A2Q9NTI2 1148 aa18.19■□□□□ 0.5
PRKN-207ENST00000479615 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
PRKN-207ENST00000479615 GRK4P32298 578 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 USP14P54578 494 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 IRX3P78415 501 aaPredicted RBP18.18■□□□□ 0.5
PRKN-207ENST00000479615 MTMR2Q13614 643 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 SLC4A8Q2Y0W8 1093 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 AMOTL1Q8IY63 956 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 SLAIN1Q8ND83 568 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 COA7Q96BR5 231 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 ASCC2Q9H1I8 757 aaPredicted RBP18.18■□□□□ 0.5
PRKN-207ENST00000479615 MCM9Q9NXL9 1143 aa18.18■□□□□ 0.5
PRKN-207ENST00000479615 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
PRKN-207ENST00000479615 GDF11O95390 407 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 GH2P01242 217 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 CTGFP29279 349 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 UBXN2AP68543 259 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 IRF5Q13568 498 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 USP17L2Q6R6M4 530 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 ANKRD13CQ8N6S4 541 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 NKX2-3Q8TAU0 364 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 PXYLP1Q8TE99 480 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 SWAP70Q9UH65 585 aa18.17■□□□□ 0.5
PRKN-207ENST00000479615 FOCADQ5VW36 1801 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 POTEFA5A3E0 1075 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 PLCD1P51178 756 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 AAMPQ13685 434 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
PRKN-207ENST00000479615 DCP1AQ9NPI6 582 aaPredicted RBP18.16■□□□□ 0.5
PRKN-207ENST00000479615 PHIPQ8WWQ0 1821 aa18.16■□□□□ 0.5
PRKN-207ENST00000479615 RRP1P56182 461 aaKnown RBP18.15■□□□□ 0.5
PRKN-207ENST00000479615 PRKCZQ05513 592 aa18.15■□□□□ 0.5
PRKN-207ENST00000479615 GABPAQ06546 454 aa18.15■□□□□ 0.5
PRKN-207ENST00000479615 SH3TC2Q8TF17 1288 aa18.15■□□□□ 0.5
PRKN-207ENST00000479615 C12orf42Q96LP6 360 aa18.15■□□□□ 0.5
PRKN-207ENST00000479615 MORF4L1Q9UBU8 362 aa18.15■□□□□ 0.5
PRKN-207ENST00000479615 JAG1P78504 1218 aa18.14■□□□□ 0.49
PRKN-207ENST00000479615 PRPF38BQ5VTL8 546 aaKnown RBP18.14■□□□□ 0.49
PRKN-207ENST00000479615 LCORLQ8N3X6 602 aa18.14■□□□□ 0.49
PRKN-207ENST00000479615 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
PRKN-207ENST00000479615 FEZ1Q99689 392 aa18.14■□□□□ 0.49
PRKN-207ENST00000479615 KIAA1683Q9H0B3 1180 aa18.14■□□□□ 0.49
PRKN-207ENST00000479615 BIN2Q9UBW5 565 aaPredicted RBP18.14■□□□□ 0.49
PRKN-207ENST00000479615 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
PRKN-207ENST00000479615 PTPRFP10586 1907 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 ERC2O15083 957 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 SMARCA5O60264 1052 aaPredicted RBP18.13■□□□□ 0.49
PRKN-207ENST00000479615 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
PRKN-207ENST00000479615 SHMT1P34896 483 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 FLT3LGP49771 235 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 RAB3GAP1Q15042 981 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 GPRC5AQ8NFJ5 357 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 SDR42E1Q8WUS8 393 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
PRKN-207ENST00000479615 TTC41PQ6P2S7 1318 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 HTTP42858 3142 aa18.13■□□□□ 0.49
PRKN-207ENST00000479615 SIPA1L1O43166 1804 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L15C9J2P7 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L13C9JLJ4 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L11C9JVI0 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L18D6R9N7 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L22D6RA61 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L17D6RBQ6 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L19D6RCP7 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L20D6RJB6 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 ADCY3O60266 1144 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 ECM2O94769 699 aaPredicted RBP18.12■□□□□ 0.49
PRKN-207ENST00000479615 MBD4O95243 580 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 EN2P19622 333 aaPredicted RBP18.12■□□□□ 0.49
PRKN-207ENST00000479615 HERVK_113P62684 666 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 USP17L24Q0WX57 530 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 CCDC17Q96LX7 622 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 P2RX7Q99572 595 aaKnown RBP18.12■□□□□ 0.49
PRKN-207ENST00000479615 ARMT1Q9H993 441 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 EMILIN3Q9NT22 766 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 LOC285556D6RIA3 1793 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 CDK5RAP2Q96SN8 1893 aa18.12■□□□□ 0.49
PRKN-207ENST00000479615 GJB1P08034 283 aa18.11■□□□□ 0.49
PRKN-207ENST00000479615 GIMAP6Q6P9H5 292 aa18.11■□□□□ 0.49
PRKN-207ENST00000479615 TMEM179Q6ZVK1 233 aa18.11■□□□□ 0.49
PRKN-207ENST00000479615 GABRQQ9UN88 632 aa18.11■□□□□ 0.49
PRKN-207ENST00000479615 KIAA0100Q14667 2235 aaKnown RBP18.11■□□□□ 0.49
PRKN-207ENST00000479615 PDE4DIPQ5VU43 2346 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 MYH1P12882 1939 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 ATAD5Q96QE3 1844 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 RBBP6Q7Z6E9 1792 aaKnown RBP18.1■□□□□ 0.49
PRKN-207ENST00000479615 MAPK4P31152 587 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 CCAR1Q8IX12 1150 aaKnown RBP18.1■□□□□ 0.49
PRKN-207ENST00000479615 SH2D4AQ9H788 454 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 PCDHB15Q9Y5E8 787 aa18.1■□□□□ 0.49
PRKN-207ENST00000479615 SLC4A4Q9Y6R1 1079 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms