RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
DDX56-211ENST00000479602 A0A0C4DFX4 3053 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 EPB41L2O43491 1005 aaKnown RBP10.73□□□□□ -0.69
DDX56-211ENST00000479602 FMNL1O95466 1100 aaPredicted RBP10.73□□□□□ -0.69
DDX56-211ENST00000479602 CAPN2P17655 700 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 JAG1P78504 1218 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 SLC4A8Q2Y0W8 1093 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 DZIP1Q86YF9 867 aaKnown RBP10.73□□□□□ -0.69
DDX56-211ENST00000479602 NKX2-3Q8TAU0 364 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 OSBPL5Q9H0X9 879 aaPredicted RBP10.73□□□□□ -0.69
DDX56-211ENST00000479602 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 PIH1D3Q9NQM4 214 aaKnown RBP10.73□□□□□ -0.69
DDX56-211ENST00000479602 GJD2Q9UKL4 321 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 AGTPBP1Q9UPW5 1226 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 ZMYM6O95789 1325 aa10.73□□□□□ -0.69
DDX56-211ENST00000479602 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 H0YGN5 161 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 GOLIM4O00461 696 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 CCL5P13501 91 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 GSPT1P15170 499 aaKnown RBP10.72□□□□□ -0.69
DDX56-211ENST00000479602 PDE6AP16499 860 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 CAP2P40123 477 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 FLT3LGP49771 235 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 NT5C2P49902 561 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 FCGRTP55899 365 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 TREML2Q5T2D2 321 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 NAA16Q6N069 864 aaPredicted RBP10.72□□□□□ -0.69
DDX56-211ENST00000479602 GIMAP6Q6P9H5 292 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 CCDC84Q86UT8 332 aaPredicted RBP10.72□□□□□ -0.69
DDX56-211ENST00000479602 PROCA1Q8NCQ7 364 aaPredicted RBP10.72□□□□□ -0.69
DDX56-211ENST00000479602 APPBP2Q92624 585 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 WDR18Q9BV38 432 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 CRISPLD2Q9H0B8 497 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 PICK1Q9NRD5 415 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 LRP2BPQ9P2M1 347 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.72□□□□□ -0.69
DDX56-211ENST00000479602 MYPNQ86TC9 1320 aa10.72□□□□□ -0.69
DDX56-211ENST00000479602 SGPL1O95470 568 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 BAG3O95817 575 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 SPP2Q13103 211 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 ZMYM1Q5SVZ6 1142 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 POTEEQ6S8J3 1075 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 DOCK3Q8IZD9 2030 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 ZNF280CQ8ND82 737 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 RAET1EQ8TD07 263 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
DDX56-211ENST00000479602 TBC1D2Q9BYX2 928 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 ANTXR1Q9H6X2 564 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 DNAJC18Q9H819 358 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 PAK6Q9NQU5 681 aaPredicted RBP10.71□□□□□ -0.69
DDX56-211ENST00000479602 HELLSQ9NRZ9 838 aa10.71□□□□□ -0.69
DDX56-211ENST00000479602 HERC5Q9UII4 1024 aaKnown RBP10.71□□□□□ -0.69
DDX56-211ENST00000479602 TRIM75PA6NK02 468 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 FAM196BA6NMK8 535 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 RNF113AO15541 343 aaKnown RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 MYCP01106 439 aaPredicted RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 GNAT2P19087 354 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 HOXA7P31268 230 aaPredicted RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 PICALMQ13492 652 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 FAM110CQ1W6H9 321 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 SLC9C2Q5TAH2 1124 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 FOXP4Q8IVH2 680 aaPredicted RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 SH3RF3Q8TEJ3 882 aaPredicted RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 U2AF1L4Q8WU68 220 aaKnown RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 DNAJC2Q99543 621 aaKnown RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 RNF208Q9H0X6 261 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 UNC93B1Q9H1C4 597 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 DHX36Q9H2U1 1008 aaKnown RBP10.7□□□□□ -0.7
DDX56-211ENST00000479602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.7□□□□□ -0.7
DDX56-211ENST00000479602 PI4KBQ9UBF8 816 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 PHIPQ8WWQ0 1821 aa10.7□□□□□ -0.7
DDX56-211ENST00000479602 ADCY3O60266 1144 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 EIF5BO60841 1220 aaKnown RBP10.69□□□□□ -0.7
DDX56-211ENST00000479602 IDH1O75874 414 aaKnown RBP10.69□□□□□ -0.7
DDX56-211ENST00000479602 GCLCP48506 637 aaPredicted RBP10.69□□□□□ -0.7
DDX56-211ENST00000479602 MNX1P50219 401 aaPredicted RBP10.69□□□□□ -0.7
DDX56-211ENST00000479602 GADL1Q6ZQY3 521 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 ATP8A2Q9NTI2 1148 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 GINM1Q9NU53 330 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 RAI14Q9P0K7 980 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 MORF4L1Q9UBU8 362 aa10.69□□□□□ -0.7
DDX56-211ENST00000479602 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 ROBO3Q96MS0 1386 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 LAMA4Q16363 1823 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 ZNF532Q9HCE3 1301 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 USP17L5A8MUK1 530 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 ECM2O94769 699 aaPredicted RBP10.68□□□□□ -0.7
DDX56-211ENST00000479602 SDSP20132 328 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 MFAP1P55081 439 aaKnown RBP10.68□□□□□ -0.7
DDX56-211ENST00000479602 BACE1P56817 501 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 UBXN2AP68543 259 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 TSHZ3Q63HK5 1081 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 MAGEB6Q8N7X4 407 aa10.68□□□□□ -0.7
DDX56-211ENST00000479602 USP6NLQ92738 828 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms