RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 HMMRO75330 724 aa21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 HLA-DOAP06340 250 aa21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 PDE6AP16499 860 aa21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 HOXD10P28358 340 aa21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 PROCA1Q8NCQ7 364 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 ASCC2Q9H1I8 757 aaPredicted RBP21.14■□□□□ 0.98
ECHDC1-216ENST00000479525 TNPO2O14787 897 aaKnown RBP21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 GNRH1P01148 92 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 GH2P01242 217 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 FLT3LGP49771 235 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 PLCD1P51178 756 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 SLC9C2Q5TAH2 1124 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 SDR42E1Q8WUS8 393 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 SHISA4Q96DD7 197 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 RIOK1Q9BRS2 568 aaKnown RBP21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 AS3MTQ9HBK9 375 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 SLC45A1Q9Y2W3 748 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 ZNF532Q9HCE3 1301 aa21.13■□□□□ 0.97
ECHDC1-216ENST00000479525 MAGEB6P1A0A0J9YX57 407 aa21.12■□□□□ 0.97
ECHDC1-216ENST00000479525 ASNSP08243 561 aa21.12■□□□□ 0.97
ECHDC1-216ENST00000479525 PRMT2P55345 433 aa21.12■□□□□ 0.97
ECHDC1-216ENST00000479525 FOXP4Q8IVH2 680 aaPredicted RBP21.12■□□□□ 0.97
ECHDC1-216ENST00000479525 CYP2D6P10635 497 aa21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 CCL5P13501 91 aa21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 SH3D19Q5HYK7 790 aa21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 METTL16Q86W50 562 aaKnown RBP21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 LCORLQ8N3X6 602 aa21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 PNMA3Q9UL41 463 aa21.11■□□□□ 0.97
ECHDC1-216ENST00000479525 SMIM22K7EJ46 135 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 ADCY3O60266 1144 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 BACE1P56817 501 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 P2RX7Q99572 595 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 WDR18Q9BV38 432 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 UNC93B1Q9H1C4 597 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 ARMT1Q9H993 441 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 TCRBV5S4A2TA0A5A2 114 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 RAB3GAP1Q15042 981 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 RNF208Q9H0X6 261 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 TMOD4Q9NZQ9 345 aa21.1■□□□□ 0.97
ECHDC1-216ENST00000479525 USP17L10C9JJH3 530 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 PRKAB2O43741 272 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 RAB11FIP3O75154 756 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 POLR3DP05423 398 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 IRX3P78415 501 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 TTF1Q15361 905 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 FAM110CQ1W6H9 321 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 TSHZ3Q63HK5 1081 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 TXNRD2Q9NNW7 524 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 PAG1Q9NWQ8 432 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 SERPINB13Q9UIV8 391 aa21.09■□□□□ 0.97
ECHDC1-216ENST00000479525 INHAP05111 366 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 SHMT1P34896 483 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 SLC44A5Q8NCS7 719 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 ACER1Q8TDN7 264 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 PAGR1Q9BTK6 254 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 TBC1D2Q9BYX2 928 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 EMILIN3Q9NT22 766 aa21.08■□□□□ 0.96
ECHDC1-216ENST00000479525 CYP2D7A0A087X1C5 515 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 SLC34A2O95436 690 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 TRIM32Q13049 653 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 PABPC4Q13310 644 aaKnown RBP eCLIP21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 CERKLQ49MI3 558 aaPredicted RBP21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 SLAIN1Q8ND83 568 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 DYNLL2Q96FJ2 89 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 FEZ1Q99689 392 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 MCM9Q9NXL9 1143 aa21.07■□□□□ 0.96
ECHDC1-216ENST00000479525 MBD4O95243 580 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 UBXN2AP68543 259 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 TATDN1Q6P1N9 297 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 POTEEQ6S8J3 1075 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 CLEC10AQ8IUN9 316 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 COA7Q96BR5 231 aa21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 CRNKL1Q9BZJ0 848 aaKnown RBP21.06■□□□□ 0.96
ECHDC1-216ENST00000479525 GUCY1A2P33402 732 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 HERVK_113P62684 666 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 PDE3AQ14432 1141 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 ABCB5Q2M3G0 1257 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 Q3C1V9 767 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 TTC6Q86TZ1 520 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 LRRCC1Q9C099 1032 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 DCP1AQ9NPI6 582 aaPredicted RBP21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 ALPK3Q96L96 1907 aa21.05■□□□□ 0.96
ECHDC1-216ENST00000479525 MPHOSPH10O00566 681 aaKnown RBP21.04■□□□□ 0.96
ECHDC1-216ENST00000479525 ATP5JP18859 108 aa21.04■□□□□ 0.96
ECHDC1-216ENST00000479525 ADD2P35612 726 aa21.04■□□□□ 0.96
ECHDC1-216ENST00000479525 GCLCP48506 637 aaPredicted RBP21.04■□□□□ 0.96
ECHDC1-216ENST00000479525 SEPT2Q15019 361 aa21.04■□□□□ 0.96
ECHDC1-216ENST00000479525 C19orf81C9J6K1 198 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 CYP2B6P20813 491 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 USP17L2Q6R6M4 530 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 U2AF1L4Q8WU68 220 aaKnown RBP21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 HAUS7Q99871 368 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 EHD4Q9H223 541 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 PORCNQ9H237 461 aa21.03■□□□□ 0.96
ECHDC1-216ENST00000479525 IGSF3O75054 1194 aa21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 GJB1P08034 283 aa21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 HOXA7P31268 230 aaPredicted RBP21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 GJA8P48165 433 aa21.02■□□□□ 0.96
ECHDC1-216ENST00000479525 GABPAQ06546 454 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms