RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
CNKSR3-204ENST00000479339 DDX60Q8IY21 1712 aaKnown RBP15.03■□□□□ -0
CNKSR3-204ENST00000479339 MNAT1P51948 309 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 TUBB2AQ13885 445 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 KSR2Q6VAB6 950 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 TMC4Q7Z404 712 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 TUBB2BQ9BVA1 445 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 RTFDC1Q9BY42 306 aaPredicted RBP15.02■□□□□ -0
CNKSR3-204ENST00000479339 FAN1Q9Y2M0 1017 aa15.02■□□□□ -0
CNKSR3-204ENST00000479339 CCDC189A1A4V9 331 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 IRS4O14654 1257 aaPredicted RBP15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 ARHGAP6O43182 974 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 CBFA2T2O43439 604 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 HSP90B1P14625 803 aaKnown RBP15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 FAM160A1Q05DH4 1040 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 RESTQ13127 1097 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 MSANTD4Q8NCY6 345 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 CNNM3Q8NE01 707 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 JDP2Q8WYK2 163 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 IFNKQ9P0W0 207 aa15.02□□□□□ -0.01
CNKSR3-204ENST00000479339 IQCA1LA6NCM1 817 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 PCCAP05165 728 aaPredicted RBP15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 TTLL5Q6EMB2 1281 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 SUPT20HQ8NEM7 779 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 CWC25Q9NXE8 425 aaPredicted RBP15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 TPCN1Q9ULQ1 816 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 MAP3K2Q9Y2U5 619 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 MYH15Q9Y2K3 1946 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 COL4A5P29400 1685 aa15.01□□□□□ -0.01
CNKSR3-204ENST00000479339 VWA3AA6NCI4 1184 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 PATL2C9JE40 543 aaKnown RBP15□□□□□ -0.01
CNKSR3-204ENST00000479339 FANCGO15287 622 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
CNKSR3-204ENST00000479339 LARGE2Q8N3Y3 721 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 NECAB1Q8N987 351 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 PI4K2BQ8TCG2 481 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
CNKSR3-204ENST00000479339 L1RE1Q9UN81 338 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 PI4KAP2A4QPH2 592 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 MYO1BO43795 1136 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 CPA1P15085 419 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 LRCH2Q5VUJ6 765 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 CEP112Q8N8E3 955 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 PI4KAP1Q8N8J0 262 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 TBC1D22AQ8WUA7 517 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 EPC1Q9H2F5 836 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 RCOR1Q9UKL0 485 aa15□□□□□ -0.01
CNKSR3-204ENST00000479339 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 HNRNPH1P31943 449 aaKnown RBP14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 MCM6Q14566 821 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 DPP8Q6V1X1 898 aaPredicted RBP14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 G2E3Q7L622 706 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 SRGAP1Q7Z6B7 1085 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 GPC2Q8N158 579 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 CTCFLQ8NI51 663 aaPredicted RBP14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 PPP2R2CQ9Y2T4 447 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 EIF6P56537 245 aaKnown RBP14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 CHMP4BP1P59074 171 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 ENGASEQ8NFI3 743 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 TAF1DQ9H5J8 278 aaPredicted RBP14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 VIPAS39Q9H9C1 493 aa14.99□□□□□ -0.01
CNKSR3-204ENST00000479339 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 IKBKBO14920 756 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 PPIP5K2O43314 1243 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 GNG11P61952 73 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 ADCK5Q3MIX3 580 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 NIM1KQ8IY84 436 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 GIMAP7Q8NHV1 300 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 AFAP1L1Q8TED9 768 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 CELF1Q92879 486 aaKnown RBP14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 KIFC2Q96AC6 838 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 SCN4AP35499 1836 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 CDHR2Q9BYE9 1310 aa14.98□□□□□ -0.01
CNKSR3-204ENST00000479339 PDE8AO60658 829 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 ERCC3P19447 782 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 NECTIN1Q15223 517 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 AOC3Q16853 763 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 GBP6Q6ZN66 633 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 GNL3LQ9NVN8 582 aaKnown RBP14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 HACL1Q9UJ83 578 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 LRRC37AA6NMS7 1700 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 TMCO5BA8MYB1 307 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 AARSP49588 968 aaKnown RBP eCLIP14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 NEXNQ0ZGT2 675 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 FLIIQ13045 1269 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 SAMD1Q6SPF0 538 aaPredicted RBP14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 CWC27Q6UX04 472 aaKnown RBP14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 DNAJC5GQ8N7S2 189 aa14.97□□□□□ -0.01
CNKSR3-204ENST00000479339 PNMA6EA0A0J9YXQ4 647 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 NEDD9Q14511 834 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 LDHDQ86WU2 507 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 CCDC102AQ96A19 550 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 FAM204AQ9H8W3 233 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 ANKZF1Q9H8Y5 726 aa14.96□□□□□ -0.01
CNKSR3-204ENST00000479339 NEURL1BA8MQ27 555 aa14.95□□□□□ -0.02
CNKSR3-204ENST00000479339 CUTAO60888 179 aa14.95□□□□□ -0.02
CNKSR3-204ENST00000479339 RPS8P62241 208 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms