RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 YY1AP1Q9H869 796 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 ARFGAP3Q9NP61 516 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 CCP110O43303 1012 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 EVX2Q03828 476 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 ATL3Q6DD88 541 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 SHC4Q6S5L8 630 aa16.13■□□□□ 0.17
CCDC78-210ENST00000478979 FAM177A1Q8N128 213 aaPredicted RBP16.13■□□□□ 0.17
CCDC78-210ENST00000478979 MYH3P11055 1940 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 SLIT2O94813 1529 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 AKNAD1Q5T1N1 836 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 SPEF2Q9C093 1822 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 H3BQF6 201 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 CDKL5O76039 1030 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 DYNLL1P63167 89 aaKnown RBP16.12■□□□□ 0.17
CCDC78-210ENST00000478979 CCDC152Q4G0S7 254 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 ICE2Q659A1 982 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 FUT8Q9BYC5 575 aa16.12■□□□□ 0.17
CCDC78-210ENST00000478979 ACTN2P35609 894 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 WTAPQ15007 396 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 SLC39A14Q15043 492 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 GRAMD1CQ8IYS0 662 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 GPR161Q8N6U8 529 aaKnown RBP16.11■□□□□ 0.17
CCDC78-210ENST00000478979 PSD3Q9NYI0 1048 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 A0A1W2PQ27 194 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 A0A1W2PQ64 194 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 A0A1W2PQD8 194 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 NTRK3Q16288 839 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 ZNF827Q17R98 1081 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 MARCH10Q8NA82 808 aaPredicted RBP16.11■□□□□ 0.17
CCDC78-210ENST00000478979 TAF1P21675 1872 aa16.11■□□□□ 0.17
CCDC78-210ENST00000478979 ERICH2A1L162 156 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 ERVV-1B6SEH8 477 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 DIS3L2Q8IYB7 885 aaKnown RBP16.1■□□□□ 0.17
CCDC78-210ENST00000478979 PARD6BQ9BYG5 372 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 STRCQ7RTU9 1775 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 RTN1Q16799 776 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 LONRF3Q496Y0 759 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 OXER1Q8TDS5 423 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 TMEM87BQ96K49 555 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 NACAP1Q9BZK3 213 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 MTMR7Q9Y216 660 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 CAMTA2O94983 1202 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 IQUBQ8NA54 791 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 UBAC1Q9BSL1 405 aa16.1■□□□□ 0.17
CCDC78-210ENST00000478979 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC78-210ENST00000478979 CMA1P23946 247 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 PIP4K2BP78356 416 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 DHX8Q14562 1220 aaKnown RBP16.09■□□□□ 0.17
CCDC78-210ENST00000478979 SLC51AQ86UW1 340 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 GOLGA6L1Q8N7Z2 621 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 GEMIN8Q9NWZ8 242 aaKnown RBP16.09■□□□□ 0.17
CCDC78-210ENST00000478979 KLRK1P26718 216 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 CNNM3Q8NE01 707 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 LRP6O75581 1613 aa16.09■□□□□ 0.17
CCDC78-210ENST00000478979 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.17
CCDC78-210ENST00000478979 PTF1AQ7RTS3 328 aa16.08■□□□□ 0.17
CCDC78-210ENST00000478979 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.17
CCDC78-210ENST00000478979 VWA3AA6NCI4 1184 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 NLRP12P59046 1061 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 FANCCQ00597 558 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 LEKR1Q6ZMV7 388 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 BPIFA3Q9BQP9 254 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 ABCC12Q96J65 1359 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 SERPINC1P01008 464 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 NCAPHQ15003 741 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 SART3Q15020 963 aaKnown RBP16.08■□□□□ 0.16
CCDC78-210ENST00000478979 PTPAQ15257 358 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 RSRC2Q7L4I2 434 aaKnown RBP16.08■□□□□ 0.16
CCDC78-210ENST00000478979 TEX2Q8IWB9 1127 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 DPF2Q92785 391 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 ZNF512BQ96KM6 892 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-210ENST00000478979 CABP5Q9NP86 173 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
CCDC78-210ENST00000478979 NTSR2O95665 410 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 PPARAQ07869 468 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 SAFBQ15424 915 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCDC78-210ENST00000478979 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 WDR24Q96S15 920 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 MAP3K9P80192 1104 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 CFAP100Q494V2 611 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 PACS2Q86VP3 889 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 TICAM2Q86XR7 235 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 TRMT44Q8IYL2 757 aaKnown RBP16.07■□□□□ 0.16
CCDC78-210ENST00000478979 MAP3K14Q99558 947 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 VPS18Q9P253 973 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 KCNH3Q9ULD8 1083 aa16.07■□□□□ 0.16
CCDC78-210ENST00000478979 CASP1P29466 404 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 GNG11P61952 73 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 NOM1Q5C9Z4 860 aaKnown RBP16.06■□□□□ 0.16
CCDC78-210ENST00000478979 FOXR1Q6PIV2 292 aa16.06■□□□□ 0.16
CCDC78-210ENST00000478979 NOSTRINQ8IVI9 506 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms