RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 FAM196AQ6ZSG2 479 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 SNCAIPQ9Y6H5 919 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 ALKQ9UM73 1620 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 ARAP3Q8WWN8 1544 aa8.03□□□□□ -1.12
CCDC171-207ENST00000478913 PBRM1Q86U86 1689 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 FAM221AA4D161 298 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 TLR3O15455 904 aaKnown RBP8.02□□□□□ -1.13
CCDC171-207ENST00000478913 CILPO75339 1184 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 CDK8P49336 464 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 C12orf40Q86WS4 652 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 ARMC10Q8N2F6 343 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 MYRFLQ96LU7 910 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 YIPF2Q9BWQ6 316 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 SEMA6BQ9H3T3 888 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
CCDC171-207ENST00000478913 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-207ENST00000478913 DHX15O43143 795 aaKnown RBP8.01□□□□□ -1.13
CCDC171-207ENST00000478913 GREM1O60565 184 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 BMP3P12645 472 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 RAB6AP20340 208 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 MPP2Q14168 576 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 TTLL4Q14679 1199 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 SGO2Q562F6 1265 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 PPM1JQ5JR12 505 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 NT5C1AQ9BXI3 368 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 ACBD3Q9H3P7 528 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 GSX1Q9H4S2 264 aaPredicted RBP8.01□□□□□ -1.13
CCDC171-207ENST00000478913 DISC1Q9NRI5 854 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 FAM105AQ9NUU6 356 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 LRRC7Q96NW7 1537 aa8.01□□□□□ -1.13
CCDC171-207ENST00000478913 ROBO2Q9HCK4 1378 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 BTBD11A6QL63 1104 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 APOBRQ0VD83 1088 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 PAK2Q13177 524 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 CWF19L2Q2TBE0 894 aaKnown RBP8□□□□□ -1.13
CCDC171-207ENST00000478913 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 FAM20CQ8IXL6 584 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 RNF214Q8ND24 703 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 FBXO27Q8NI29 283 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 LRRC3Q9BY71 257 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 KCNF1Q9H3M0 494 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 TPSG1Q9NRR2 321 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 UBP1Q9NZI7 540 aa8□□□□□ -1.13
CCDC171-207ENST00000478913 WIZO95785 1651 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
CCDC171-207ENST00000478913 HCLS1P14317 486 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-207ENST00000478913 MAP4P27816 1152 aaKnown RBP7.99□□□□□ -1.13
CCDC171-207ENST00000478913 RING1Q06587 406 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 DOC2BQ14184 412 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 TTC37Q6PGP7 1564 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 REC114Q7Z4M0 266 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 FBLIM1Q8WUP2 373 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-207ENST00000478913 INPP5FQ9Y2H2 1132 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 LRP5O75197 1615 aa7.99□□□□□ -1.13
CCDC171-207ENST00000478913 CUL7Q14999 1698 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 GFRA2O00451 464 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 FANCGO15287 622 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 CRKP46108 304 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 ETF1P62495 437 aaKnown RBP7.98□□□□□ -1.13
CCDC171-207ENST00000478913 SEZ6Q53EL9 994 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 SMYD4Q8IYR2 804 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-207ENST00000478913 NKD1Q969G9 470 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 ACSS3Q9H6R3 686 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 SSU72Q9NP77 194 aaKnown RBP7.98□□□□□ -1.13
CCDC171-207ENST00000478913 DAGLAQ9Y4D2 1042 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 TACC3Q9Y6A5 838 aa7.98□□□□□ -1.13
CCDC171-207ENST00000478913 NEFMP07197 916 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 TNNI2P48788 182 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 BEND4Q6ZU67 534 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 GPRASP2Q96D09 838 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 WNT10AQ9GZT5 417 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 FANCAO15360 1455 aa7.97□□□□□ -1.13
CCDC171-207ENST00000478913 CAMSAP1Q5T5Y3 1602 aa7.96□□□□□ -1.13
CCDC171-207ENST00000478913 GRIN3BO60391 1043 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 NFICP08651 508 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 NTF4P34130 210 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 GJA8P48165 433 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 PDE4BQ07343 736 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 GNL2Q13823 731 aaKnown RBP7.96□□□□□ -1.14
CCDC171-207ENST00000478913 MAP7Q14244 749 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 PRR23CQ6ZRP0 262 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 CDC37L1Q7L3B6 337 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 EZH1Q92800 747 aaPredicted RBP7.96□□□□□ -1.14
CCDC171-207ENST00000478913 ISL2Q96A47 359 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 SEMA6CQ9H3T2 930 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 CAPN10Q9HC96 672 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 BRMS1Q9HCU9 246 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 RAXQ9Y2V3 346 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 CUX1P39880 1505 aa7.96□□□□□ -1.14
CCDC171-207ENST00000478913 FHAD1B1AJZ9 1412 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 FAM95CA0A1B0GW59 222 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 GRK4P32298 578 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 MCM4P33991 863 aa7.95□□□□□ -1.14
CCDC171-207ENST00000478913 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms