RNA–Protein interactions for RNA: ENST00000478800.1

CDKN1A-207, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 2

Gene CDKN1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-207ENST00000478800 TRIM17Q9Y577 477 aa20.39■□□□□ 0.85
CDKN1A-207ENST00000478800 GH2P01242 217 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 PDE1AP54750 535 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 MOGSQ13724 837 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 WDR18Q9BV38 432 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 AGTPBP1Q9UPW5 1226 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 DOCK1Q14185 1865 aa20.38■□□□□ 0.85
CDKN1A-207ENST00000478800 HMGCS2P54868 508 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 ABCB5Q2M3G0 1257 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 GPAT2Q6NUI2 795 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 CHD1LQ86WJ1 897 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 PROCA1Q8NCQ7 364 aaPredicted RBP20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 STRBPQ96SI9 672 aaKnown RBP20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 EFCC1Q9HA90 598 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 SWAP70Q9UH65 585 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 PNMA3Q9UL41 463 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 TAOK2Q9UL54 1235 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 SLC45A1Q9Y2W3 748 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 FOCADQ5VW36 1801 aa20.37■□□□□ 0.85
CDKN1A-207ENST00000478800 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 CYP2C8P10632 490 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 CYP2D6P10635 497 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 GNAT2P19087 354 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 MTMR2Q13614 643 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 FBXO46Q6PJ61 603 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 SMCR8Q8TEV9 937 aaPredicted RBP20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 OSBP2Q969R2 916 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 CPA4Q9UI42 421 aa20.36■□□□□ 0.85
CDKN1A-207ENST00000478800 C19orf81C9J6K1 198 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 USP17L10C9JJH3 530 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 USP17L12C9JPN9 530 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 USP17L21D6R901 530 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 MPHOSPH10O00566 681 aaKnown RBP20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 GPAA1O43292 621 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 APPP05067 770 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 BACE1P56817 501 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 NUCB1Q02818 461 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 OTOP1Q7RTM1 612 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 FEZ1Q99689 392 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 ARPP21Q9UBL0 812 aaPredicted RBP20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 CDK5RAP2Q96SN8 1893 aa20.35■□□□□ 0.85
CDKN1A-207ENST00000478800 OSBPP22059 807 aa20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 SHMT1P34896 483 aa20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 JAG1P78504 1218 aa20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 GABPAQ06546 454 aa20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 SHROOM1Q2M3G4 852 aaPredicted RBP20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 C17orf99Q6UX52 265 aa20.34■□□□□ 0.85
CDKN1A-207ENST00000478800 MYH1P12882 1939 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 TRIM6-TRIM34B2RNG4 842 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 TDO2P48775 406 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 LACTBP83111 547 aaPredicted RBP20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 SH3D19Q5HYK7 790 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 TREML2Q5T2D2 321 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 C12orf60Q5U649 245 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 GIMAP6Q6P9H5 292 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 NACAP1Q9BZK3 213 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 HPS5Q9UPZ3 1129 aa20.33■□□□□ 0.85
CDKN1A-207ENST00000478800 SIPA1L1O43166 1804 aa20.32■□□□□ 0.84
CDKN1A-207ENST00000478800 CTR9Q6PD62 1173 aa20.32■□□□□ 0.84
CDKN1A-207ENST00000478800 USP17L2Q6R6M4 530 aa20.32■□□□□ 0.84
CDKN1A-207ENST00000478800 DYNLL2Q96FJ2 89 aa20.32■□□□□ 0.84
CDKN1A-207ENST00000478800 NAV1Q8NEY1 1877 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 CYP2D7A0A087X1C5 515 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 M0R2C6 588 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 ECM2O94769 699 aaPredicted RBP20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 IRX3P78415 501 aaPredicted RBP20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 EVX2Q03828 476 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 SLC44A5Q8NCS7 719 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 RILPL2Q969X0 211 aa20.31■□□□□ 0.84
CDKN1A-207ENST00000478800 GSG1L2A8MUP6 293 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 MINDY4BA8MYZ0 360 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 FMNL1O95466 1100 aaPredicted RBP20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 GNRH1P01148 92 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 HOXD10P28358 340 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 USP14P54578 494 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 ZYXQ15942 572 aaKnown RBP20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 ZMYM1Q5SVZ6 1142 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 TMEM179Q6ZVK1 233 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 CCDC17Q96LX7 622 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 TNRC18O15417 2968 aaPredicted RBP20.3■□□□□ 0.84
CDKN1A-207ENST00000478800 ADGRA2Q96PE1 1338 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 PATL2C9JE40 543 aaKnown RBP20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 PSMC4P43686 418 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 CDK8P49336 464 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 SEPT2Q15019 361 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 SBK1Q52WX2 424 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 C16orf86Q6ZW13 317 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 SEC62Q99442 399 aaKnown RBP20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 MYH7P12883 1935 aa20.29■□□□□ 0.84
CDKN1A-207ENST00000478800 GCLCP48506 637 aaPredicted RBP20.28■□□□□ 0.84
CDKN1A-207ENST00000478800 FCGRTP55899 365 aa20.28■□□□□ 0.84
CDKN1A-207ENST00000478800 TICAM2Q86XR7 235 aa20.28■□□□□ 0.84
CDKN1A-207ENST00000478800 PLEKHM2Q8IWE5 1019 aa20.28■□□□□ 0.84
CDKN1A-207ENST00000478800 NAPBQ9H115 298 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms