RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 BEND3Q5T5X7 828 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 PLEKHH3Q7Z736 793 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 GPRC5AQ8NFJ5 357 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 NPLOC4Q8TAT6 608 aa15.48■□□□□ 0.07
HDAC8-217ENST00000478743 UTYO14607 1347 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 MROH5Q6ZUA9 1318 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 ENTPD3O75355 529 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 MAPK4P31152 587 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 ADCYAP1R1P41586 468 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 IRX3P78415 501 aaPredicted RBP15.47■□□□□ 0.07
HDAC8-217ENST00000478743 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.07
HDAC8-217ENST00000478743 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 SUCLG2Q96I99 432 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
HDAC8-217ENST00000478743 MYCNP04198 464 aaPredicted RBP15.46■□□□□ 0.07
HDAC8-217ENST00000478743 CYBAP13498 195 aa15.46■□□□□ 0.07
HDAC8-217ENST00000478743 JAG1P78504 1218 aa15.46■□□□□ 0.07
HDAC8-217ENST00000478743 MTMR2Q13614 643 aa15.46■□□□□ 0.07
HDAC8-217ENST00000478743 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.46■□□□□ 0.077e-6■■□□□ 11.5
HDAC8-217ENST00000478743 GRM8O00222 908 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 CNMDO75829 334 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 IGHA2P01877 340 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 FGFR2P21802 821 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 FPGSQ05932 587 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 MFSD14CQ5VZR4 134 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 MICALL1Q8N3F8 863 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 KLHDC4Q8TBB5 520 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 WDFY4Q6ZS81 3184 aa15.45■□□□□ 0.06
HDAC8-217ENST00000478743 CACNA1AO00555 2505 aa15.44■□□□□ 0.06
HDAC8-217ENST00000478743 GPR37L1O60883 481 aa15.44■□□□□ 0.06
HDAC8-217ENST00000478743 PDE8BO95263 885 aa15.44■□□□□ 0.06
HDAC8-217ENST00000478743 CLTBP09497 229 aa15.44■□□□□ 0.06
HDAC8-217ENST00000478743 WDR66Q8TBY9 1149 aa15.44■□□□□ 0.06
HDAC8-217ENST00000478743 EDC3Q96F86 508 aaKnown RBP15.44■□□□□ 0.06
HDAC8-217ENST00000478743 GAKO14976 1311 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 KBTBD13C9JR72 458 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 APAF1O14727 1248 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 MSCO60682 206 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 HOXA7P31268 230 aaPredicted RBP15.43■□□□□ 0.06
HDAC8-217ENST00000478743 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
HDAC8-217ENST00000478743 CCDC129Q6ZRS4 1044 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 C16orf59Q7L2K0 433 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 NKX2-4Q9H2Z4 354 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC8-217ENST00000478743 CD320Q9NPF0 282 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 CACNA1FO60840 1977 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 ZNF236Q9UL36 1845 aa15.43■□□□□ 0.06
HDAC8-217ENST00000478743 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
HDAC8-217ENST00000478743 LDHBP07195 334 aaKnown RBP15.42■□□□□ 0.06
HDAC8-217ENST00000478743 RAG1P15918 1043 aa15.42■□□□□ 0.06
HDAC8-217ENST00000478743 ZEB1P37275 1124 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-217ENST00000478743 LRRC41Q15345 812 aa15.42■□□□□ 0.06
HDAC8-217ENST00000478743 FAM47AQ5JRC9 791 aa15.42■□□□□ 0.06
HDAC8-217ENST00000478743 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-217ENST00000478743 OSBPL5Q9H0X9 879 aaPredicted RBP15.42■□□□□ 0.06
HDAC8-217ENST00000478743 YBX2Q9Y2T7 364 aaKnown RBP15.42■□□□□ 0.06
HDAC8-217ENST00000478743 PQBP1O60828 265 aaKnown RBP15.41■□□□□ 0.06
HDAC8-217ENST00000478743 CAP2P40123 477 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 NHLH1Q02575 133 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 RASIP1Q5U651 963 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 TACC3Q9Y6A5 838 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 KIF16BQ96L93 1317 aa15.41■□□□□ 0.06
HDAC8-217ENST00000478743 A0A0G2JMZ2 1700 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 TRANK1O15050 2925 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 TBC1D12O60347 775 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 PTPREP23469 700 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 BTDP43251 543 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
HDAC8-217ENST00000478743 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
HDAC8-217ENST00000478743 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
HDAC8-217ENST00000478743 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 BACE1P56817 501 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 RHBDL3P58872 404 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 FAAP100Q0VG06 881 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 PUM3Q15397 648 aaKnown RBP15.39■□□□□ 0.05
HDAC8-217ENST00000478743 PRAMEF19Q5SWL8 479 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 CCAR1Q8IX12 1150 aaKnown RBP15.39■□□□□ 0.05
HDAC8-217ENST00000478743 ANKRD44Q8N8A2 993 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 ARRDC4Q8NCT1 418 aa15.39■□□□□ 0.05
HDAC8-217ENST00000478743 BICC1Q9H694 974 aaKnown RBP15.39■□□□□ 0.05
HDAC8-217ENST00000478743 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 PRRC2BQ5JSZ5 2229 aaKnown RBP15.38■□□□□ 0.05
HDAC8-217ENST00000478743 SLC15A5A6NIM6 579 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 TLL1O43897 1013 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 HOXC6P09630 235 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 ACRP10323 421 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 GRB14Q14449 540 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 KRT40Q6A162 431 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 ZNF384Q8TF68 577 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 CWC22Q9HCG8 908 aaKnown RBP15.38■□□□□ 0.05
HDAC8-217ENST00000478743 MYBBP1AQ9BQG0 1328 aaKnown RBP15.38■□□□□ 0.05
HDAC8-217ENST00000478743 SALL1Q9NSC2 1324 aa15.38■□□□□ 0.05
HDAC8-217ENST00000478743 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms