RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 APBA2Q99767 749 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 DOCK2Q92608 1830 aa17.84■□□□□ 0.45
USP11-207ENST00000478596 AK9Q5TCS8 1911 aa17.83■□□□□ 0.44
USP11-207ENST00000478596 DDTLA6NHG4 134 aaPredicted RBP17.83■□□□□ 0.44
USP11-207ENST00000478596 SLURP2P0DP57 97 aa17.83■□□□□ 0.44
USP11-207ENST00000478596 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.44
USP11-207ENST00000478596 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.44
USP11-207ENST00000478596 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.44
USP11-207ENST00000478596 DDX20Q9UHI6 824 aaKnown RBP17.83■□□□□ 0.44
USP11-207ENST00000478596 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
USP11-207ENST00000478596 TBC1D12O60347 775 aa17.82■□□□□ 0.44
USP11-207ENST00000478596 PRDX5P30044 214 aa17.82■□□□□ 0.44
USP11-207ENST00000478596 C1orf115Q9H7X2 142 aa17.82■□□□□ 0.44
USP11-207ENST00000478596 TXNRD2Q9NNW7 524 aa17.82■□□□□ 0.44
USP11-207ENST00000478596 PRDM5Q9NQX1 630 aaPredicted RBP17.82■□□□□ 0.44
USP11-207ENST00000478596 HCN4Q9Y3Q4 1203 aa17.82■□□□□ 0.44
USP11-207ENST00000478596 GNAI2P04899 355 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
USP11-207ENST00000478596 DNAJB2P25686 324 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 SNX17Q15036 470 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 LRRC24Q50LG9 513 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 RNPC3Q96LT9 517 aaKnown RBP17.81■□□□□ 0.44
USP11-207ENST00000478596 USP44Q9H0E7 712 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 OSBPL5Q9H0X9 879 aaPredicted RBP17.81■□□□□ 0.44
USP11-207ENST00000478596 ZNF576Q9H609 170 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
USP11-207ENST00000478596 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 IFIT1P09914 478 aaKnown RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 FGFR2P21802 821 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 HOXA7P31268 230 aaPredicted RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 IRX3P78415 501 aaPredicted RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 PUM3Q15397 648 aaKnown RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 SLC39A5Q6ZMH5 540 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 GPR142Q7Z601 462 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
USP11-207ENST00000478596 P2RX7Q99572 595 aaKnown RBP17.8■□□□□ 0.44
USP11-207ENST00000478596 UTYO14607 1347 aa17.79■□□□□ 0.44
USP11-207ENST00000478596 TRIM43BA6NCK2 446 aa17.79■□□□□ 0.44
USP11-207ENST00000478596 MFSD14CQ5VZR4 134 aa17.79■□□□□ 0.44
USP11-207ENST00000478596 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
USP11-207ENST00000478596 IL27Q8NEV9 243 aa17.79■□□□□ 0.44
USP11-207ENST00000478596 TRIM43Q96BQ3 446 aaPredicted RBP17.79■□□□□ 0.44
USP11-207ENST00000478596 GAKO14976 1311 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 FRMPD3Q5JV73 1810 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
USP11-207ENST00000478596 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
USP11-207ENST00000478596 PEX10O60683 326 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 HERVK_113P62684 666 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 POTEEQ6S8J3 1075 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 GAS2L1Q99501 681 aaPredicted RBP17.78■□□□□ 0.44
USP11-207ENST00000478596 PORCNQ9H237 461 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 BICC1Q9H694 974 aaKnown RBP17.78■□□□□ 0.44
USP11-207ENST00000478596 RBPJLQ9UBG7 517 aa17.78■□□□□ 0.44
USP11-207ENST00000478596 ERVK-9P63128 1117 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 ERVK-24P63145 666 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 MAP2K5Q13163 448 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 Q3C1V9 767 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 TRIM60Q495X7 471 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 SH3RF1Q7Z6J0 888 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
USP11-207ENST00000478596 ARRDC4Q8NCT1 418 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 PPM1EQ8WY54 764 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 TIFAQ96CG3 184 aa17.77■□□□□ 0.44
USP11-207ENST00000478596 DDX4Q9NQI0 724 aaKnown RBP17.77■□□□□ 0.44
USP11-207ENST00000478596 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
USP11-207ENST00000478596 USP17L5A8MUK1 530 aa17.76■□□□□ 0.43
USP11-207ENST00000478596 EPHB4P54760 987 aa17.76■□□□□ 0.43
USP11-207ENST00000478596 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
USP11-207ENST00000478596 GTF3C2Q8WUA4 911 aaPredicted RBP17.76■□□□□ 0.43
USP11-207ENST00000478596 EDC3Q96F86 508 aaKnown RBP17.76■□□□□ 0.43
USP11-207ENST00000478596 LRFN3Q9BTN0 628 aa17.76■□□□□ 0.43
USP11-207ENST00000478596 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.76■□□□□ 0.43
USP11-207ENST00000478596 FLRT1Q9NZU1 646 aa17.76■□□□□ 0.43
USP11-207ENST00000478596 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
USP11-207ENST00000478596 CAP2P40123 477 aa17.75■□□□□ 0.43
USP11-207ENST00000478596 GJC2Q5T442 439 aaPredicted RBP17.75■□□□□ 0.43
USP11-207ENST00000478596 LPIN2Q92539 896 aa17.75■□□□□ 0.43
USP11-207ENST00000478596 WDR18Q9BV38 432 aa17.75■□□□□ 0.43
USP11-207ENST00000478596 AS3MTQ9HBK9 375 aa17.75■□□□□ 0.43
USP11-207ENST00000478596 HOXC6P09630 235 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 ITGB8P26012 769 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 CNGA1P29973 690 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 BACE1P56817 501 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 SNX27Q96L92 541 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 ZBTB40Q9NUA8 1239 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 TMOD4Q9NZQ9 345 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 TACC3Q9Y6A5 838 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 RLFQ13129 1914 aa17.74■□□□□ 0.43
USP11-207ENST00000478596 FAM196BA6NMK8 535 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 KBTBD13C9JR72 458 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 HMMRO75330 724 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 IGHA2P01877 340 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 BMP1P13497 986 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 SLC5A1P13866 664 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 PICALMQ13492 652 aa17.73■□□□□ 0.43
USP11-207ENST00000478596 MTMR2Q13614 643 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms