RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 SMC5Q8IY18 1101 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 CD99L2Q8TCZ2 262 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 SDR42E1Q8WUS8 393 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 DNAJC18Q9H819 358 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 STAP2Q9UGK3 403 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 ZBTB21Q9ULJ3 1066 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 SLC4A4Q9Y6R1 1079 aa18.12■□□□□ 0.49
SNX21-210ENST00000478230 PRMT2P55345 433 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 BACE1P56817 501 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 SLC4A8Q2Y0W8 1093 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 OTOP1Q7RTM1 612 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 SMCR8Q8TEV9 937 aaPredicted RBP18.11■□□□□ 0.49
SNX21-210ENST00000478230 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
SNX21-210ENST00000478230 MYH1P12882 1939 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 PLCD1P51178 756 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 USP14P54578 494 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 LACTBP83111 547 aaPredicted RBP18.1■□□□□ 0.49
SNX21-210ENST00000478230 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 EVI5LQ96CN4 794 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 CCDC17Q96LX7 622 aa18.1■□□□□ 0.49
SNX21-210ENST00000478230 PUS7LQ9H0K6 701 aaKnown RBP18.1■□□□□ 0.49
SNX21-210ENST00000478230 ARPP21Q9UBL0 812 aaPredicted RBP18.1■□□□□ 0.49
SNX21-210ENST00000478230 GDF11O95390 407 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 GH2P01242 217 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 GCLCP48506 637 aaPredicted RBP18.09■□□□□ 0.49
SNX21-210ENST00000478230 PDE1AP54750 535 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 HMGCS2P54868 508 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 GABPAQ06546 454 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 RRP1BQ14684 758 aaKnown RBP18.09■□□□□ 0.49
SNX21-210ENST00000478230 STRBPQ96SI9 672 aaKnown RBP18.09■□□□□ 0.49
SNX21-210ENST00000478230 NACAP1Q9BZK3 213 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 ZNF287Q9HBT7 754 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 CDK5RAP2Q96SN8 1893 aa18.09■□□□□ 0.49
SNX21-210ENST00000478230 USP17L12C9JPN9 530 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 USP17L21D6R901 530 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 RAB3GAP1Q15042 981 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 USP17L2Q6R6M4 530 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 NBPF11Q86T75 865 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 CHD1LQ86WJ1 897 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 FEZ1Q99689 392 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 CPA4Q9UI42 421 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 HPS5Q9UPZ3 1129 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 PTPN22Q9Y2R2 807 aa18.08■□□□□ 0.48
SNX21-210ENST00000478230 SALL3Q9BXA9 1300 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 PRKAB2O43741 272 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 SHMT1P34896 483 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 IRX3P78415 501 aaPredicted RBP18.07■□□□□ 0.48
SNX21-210ENST00000478230 MTMR2Q13614 643 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 SBK1Q52WX2 424 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 CCDC84Q86UT8 332 aaPredicted RBP18.07■□□□□ 0.48
SNX21-210ENST00000478230 OTUD7AQ8TE49 926 aaPredicted RBP18.07■□□□□ 0.48
SNX21-210ENST00000478230 GTF3C2Q8WUA4 911 aaPredicted RBP18.07■□□□□ 0.48
SNX21-210ENST00000478230 OSBP2Q969R2 916 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 LNPKQ9C0E8 428 aa18.07■□□□□ 0.48
SNX21-210ENST00000478230 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.07■□□□□ 0.48
SNX21-210ENST00000478230 PATL2C9JE40 543 aaKnown RBP18.06■□□□□ 0.48
SNX21-210ENST00000478230 MPHOSPH10O00566 681 aaKnown RBP18.06■□□□□ 0.48
SNX21-210ENST00000478230 GPAA1O43292 621 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 APPP05067 770 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 CYP2C8P10632 490 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 HOXA7P31268 230 aaPredicted RBP18.06■□□□□ 0.48
SNX21-210ENST00000478230 FCGRTP55899 365 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 NUCB1Q02818 461 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 SLFNL1Q499Z3 407 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 TMEM179Q6ZVK1 233 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 KIAA1683Q9H0B3 1180 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 SH2D4AQ9H788 454 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 MYH7P12883 1935 aa18.06■□□□□ 0.48
SNX21-210ENST00000478230 ADGRA2Q96PE1 1338 aa18.05■□□□□ 0.48
SNX21-210ENST00000478230 FMNL1O95466 1100 aaPredicted RBP18.05■□□□□ 0.48
SNX21-210ENST00000478230 BCRP11274 1271 aa18.05■□□□□ 0.48
SNX21-210ENST00000478230 PSMC4P43686 418 aa18.05■□□□□ 0.48
SNX21-210ENST00000478230 TDO2P48775 406 aa18.05■□□□□ 0.48
SNX21-210ENST00000478230 CTR9Q6PD62 1173 aa18.05■□□□□ 0.48
SNX21-210ENST00000478230 IGHDP01880 384 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 SLC3A2P08195 630 aaKnown RBP18.04■□□□□ 0.48
SNX21-210ENST00000478230 CDK8P49336 464 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 ZMYM1Q5SVZ6 1142 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 TREML2Q5T2D2 321 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 OSBPL3Q9H4L5 887 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 SIPA1L1O43166 1804 aa18.04■□□□□ 0.48
SNX21-210ENST00000478230 PHIPQ8WWQ0 1821 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 GSG1L2A8MUP6 293 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 TRIM6-TRIM34B2RNG4 842 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 JAG1P78504 1218 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 FAM110CQ1W6H9 321 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 C12orf42Q96LP6 360 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 ASCC2Q9H1I8 757 aaPredicted RBP18.03■□□□□ 0.48
SNX21-210ENST00000478230 MKNK2Q9HBH9 465 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
SNX21-210ENST00000478230 NAV1Q8NEY1 1877 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms