RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 TTMPQ5BVD1 217 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 CCNI2Q6ZMN8 369 aaPredicted RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 USP49Q70CQ1 688 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 SH2D3CQ8N5H7 860 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 HAUS7Q99871 368 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 ADD3Q9UEY8 706 aaKnown RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 TTF2Q9UNY4 1162 aaKnown RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 NDUFAB1O14561 156 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
COL13A1-207ENST00000478219 ATP1A2P50993 1020 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 ANTXR2P58335 489 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 TUBB4BP68371 445 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 PPARDQ03181 441 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 NAIF1Q69YI7 327 aaPredicted RBP11.12□□□□□ -0.63
COL13A1-207ENST00000478219 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 PHKBQ93100 1093 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
COL13A1-207ENST00000478219 BABAM1Q9NWV8 329 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 CPLX1O14810 134 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 FOXP2O15409 715 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 FSBPO95073 299 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 TUBBP07437 444 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 CCT6AP40227 531 aaKnown RBP11.12□□□□□ -0.63
COL13A1-207ENST00000478219 NEDD9Q14511 834 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 KRT40Q6A162 431 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 OTUD6BQ8N6M0 293 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 DSCC1Q9BVC3 393 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
COL13A1-207ENST00000478219 MAST3O60307 1309 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 SH3TC1Q8TE82 1336 aa11.12□□□□□ -0.63
COL13A1-207ENST00000478219 M0R2C6 588 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 MEFVO15553 781 aaPredicted RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 ZMYM6O95789 1325 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 C2orf54Q08AI8 447 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 PREPLQ4J6C6 727 aaPredicted RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 TTC39AQ5SRH9 613 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 KCTD16Q68DU8 428 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 MLKLQ8NB16 471 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 TSEN2Q8NCE0 465 aaKnown RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 RNF217Q8TC41 542 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 STAG1Q8WVM7 1258 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 CEMIPQ8WUJ3 1361 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 UTYO14607 1347 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 PATL2C9JE40 543 aaKnown RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 PRC1O43663 620 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 NEBLO76041 1014 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 PDHBP11177 359 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 HDGFP51858 240 aaKnown RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 NT5DC1Q5TFE4 455 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 SND1Q7KZF4 910 aaKnown RBP eCLIP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 AENQ8WTP8 325 aaKnown RBP11.11□□□□□ -0.63
COL13A1-207ENST00000478219 ALG1Q9BT22 464 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 CENPHQ9H3R5 247 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
COL13A1-207ENST00000478219 MED1Q15648 1581 aaPredicted RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 MRC1P22897 1456 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 CHUKO15111 745 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 ZEB2O60315 1214 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 FECHP22830 423 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 INHBEP58166 350 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 PTPN12Q05209 780 aaKnown RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 DPYDQ12882 1025 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 SPRED3Q2MJR0 410 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 SENP2Q9HC62 589 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 KLC4Q9NSK0 619 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 ODF2LQ9ULJ1 636 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 BTBD11A6QL63 1104 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 SKAP2O75563 359 aaPredicted RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 HOXC9P31274 260 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 RFX5P48382 616 aaPredicted RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 PLCD1P51178 756 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 SETQ01105 290 aaPredicted RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 PPARAQ07869 468 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 HSP90AB3PQ58FF7 597 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 ZMYM1Q5SVZ6 1142 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 MPRIPQ6WCQ1 1025 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 VEZTQ9HBM0 779 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 DDX20Q9UHI6 824 aaKnown RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
COL13A1-207ENST00000478219 SAR1BQ9Y6B6 198 aa11.1□□□□□ -0.63
COL13A1-207ENST00000478219 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 PPP1R12AO14974 1030 aaPredicted RBP11.09□□□□□ -0.63
COL13A1-207ENST00000478219 RASSF9O75901 435 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 SEC24CP53992 1094 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 GUCY1A3Q02108 690 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 APBA1Q02410 837 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
COL13A1-207ENST00000478219 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 PLEKHG3A1L390 1219 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 SSBP05455 408 aaKnown RBP eCLIP11.09□□□□□ -0.63
COL13A1-207ENST00000478219 NF2P35240 595 aa11.09□□□□□ -0.63
COL13A1-207ENST00000478219 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
COL13A1-207ENST00000478219 HERVK_113P62684 666 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms