RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 FSD1Q9BTV5 496 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 ZBTB21Q9ULJ3 1066 aa27.38■■□□□ 1.97
TRAF4-211ENST00000478021 LOC285556D6RIA3 1793 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 TLR2O60603 784 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 PDE1AP54750 535 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 TATDN1Q6P1N9 297 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 AS3MTQ9HBK9 375 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 ATP8A2Q9NTI2 1148 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 STAP2Q9UGK3 403 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 ZSWIM8A7E2V4 1837 aa27.37■■□□□ 1.97
TRAF4-211ENST00000478021 ZFYP08048 801 aaPredicted RBP27.36■■□□□ 1.97
TRAF4-211ENST00000478021 ERO1AQ96HE7 468 aa27.36■■□□□ 1.97
TRAF4-211ENST00000478021 TBC1D2Q9BYX2 928 aa27.36■■□□□ 1.97
TRAF4-211ENST00000478021 MYH8P13535 1937 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 CYP2D7A0A087X1C5 515 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 GH2P01242 217 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 SHMT1P34896 483 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 HMGCS2P54868 508 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 CAP1Q01518 475 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 CPA4Q9UI42 421 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 TRIM17Q9Y577 477 aa27.35■■□□□ 1.97
TRAF4-211ENST00000478021 M0R2C6 588 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 CYP2C8P10632 490 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 GABPAQ06546 454 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 CERKLQ49MI3 558 aaPredicted RBP27.34■■□□□ 1.97
TRAF4-211ENST00000478021 TREML2Q5T2D2 321 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 CHD1LQ86WJ1 897 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 DYNLL2Q96FJ2 89 aa27.34■■□□□ 1.97
TRAF4-211ENST00000478021 STRBPQ96SI9 672 aaKnown RBP27.34■■□□□ 1.97
TRAF4-211ENST00000478021 CCDC85CA6NKD9 419 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 SMIM22K7EJ46 135 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 ECM2O94769 699 aaPredicted RBP27.33■■□□□ 1.97
TRAF4-211ENST00000478021 MTMR2Q13614 643 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 LRRFIP1Q32MZ4 808 aaKnown RBP27.33■■□□□ 1.97
TRAF4-211ENST00000478021 OTOP1Q7RTM1 612 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 SLC44A5Q8NCS7 719 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 DDRGK1Q96HY6 314 aa27.33■■□□□ 1.97
TRAF4-211ENST00000478021 PARK7Q99497 189 aaKnown RBP27.33■■□□□ 1.97
TRAF4-211ENST00000478021 USP17L12C9JPN9 530 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 USP17L21D6R901 530 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 GPAA1O43292 621 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 NUCB1Q02818 461 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 ABCB5Q2M3G0 1257 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 SEC62Q99442 399 aaKnown RBP27.32■■□□□ 1.96
TRAF4-211ENST00000478021 WDR18Q9BV38 432 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 GINM1Q9NU53 330 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 AGTPBP1Q9UPW5 1226 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 ADGRA2Q96PE1 1338 aa27.32■■□□□ 1.96
TRAF4-211ENST00000478021 RAB3GAP1Q15042 981 aa27.31■■□□□ 1.96
TRAF4-211ENST00000478021 PKN2Q16513 984 aaKnown RBP27.31■■□□□ 1.96
TRAF4-211ENST00000478021 PROCA1Q8NCQ7 364 aaPredicted RBP27.31■■□□□ 1.96
TRAF4-211ENST00000478021 C12orf60Q5U649 245 aa27.3■■□□□ 1.96
TRAF4-211ENST00000478021 C17orf99Q6UX52 265 aa27.3■■□□□ 1.96
TRAF4-211ENST00000478021 AMOTL1Q8IY63 956 aa27.3■■□□□ 1.96
TRAF4-211ENST00000478021 GSG1L2A8MUP6 293 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 BACE1P56817 501 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 SH3D19Q5HYK7 790 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 CTR9Q6PD62 1173 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 FBXO46Q6PJ61 603 aaPredicted RBP27.29■■□□□ 1.96
TRAF4-211ENST00000478021 EVI5LQ96CN4 794 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 ARHGAP39Q9C0H5 1083 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 EFCC1Q9HA90 598 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 CABP5Q9NP86 173 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 SLC45A1Q9Y2W3 748 aa27.29■■□□□ 1.96
TRAF4-211ENST00000478021 USP17L10C9JJH3 530 aa27.28■■□□□ 1.96
TRAF4-211ENST00000478021 MPHOSPH10O00566 681 aaKnown RBP27.28■■□□□ 1.96
TRAF4-211ENST00000478021 ZMYM1Q5SVZ6 1142 aa27.28■■□□□ 1.96
TRAF4-211ENST00000478021 PLEKHM2Q8IWE5 1019 aa27.28■■□□□ 1.96
TRAF4-211ENST00000478021 SWAP70Q9UH65 585 aa27.28■■□□□ 1.96
TRAF4-211ENST00000478021 HPS5Q9UPZ3 1129 aa27.28■■□□□ 1.96
TRAF4-211ENST00000478021 GUCY1A2P33402 732 aa27.27■■□□□ 1.96
TRAF4-211ENST00000478021 ZYXQ15942 572 aaKnown RBP27.27■■□□□ 1.96
TRAF4-211ENST00000478021 EPB41L4AQ9HCS5 686 aaPredicted RBP27.27■■□□□ 1.96
TRAF4-211ENST00000478021 TMOD4Q9NZQ9 345 aa27.27■■□□□ 1.96
TRAF4-211ENST00000478021 ARPP21Q9UBL0 812 aaPredicted RBP27.27■■□□□ 1.96
TRAF4-211ENST00000478021 LACTBP83111 547 aaPredicted RBP27.26■■□□□ 1.95
TRAF4-211ENST00000478021 SEPT2Q15019 361 aa27.26■■□□□ 1.95
TRAF4-211ENST00000478021 SMCR8Q8TEV9 937 aaPredicted RBP27.26■■□□□ 1.95
TRAF4-211ENST00000478021 FEZ1Q99689 392 aa27.26■■□□□ 1.95
TRAF4-211ENST00000478021 TRIM6-TRIM34B2RNG4 842 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 C19orf81C9J6K1 198 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 APPP05067 770 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 CDK8P49336 464 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 KIF22Q14807 665 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 CCDC129Q6ZRS4 1044 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 STK11IPQ8N1F8 1099 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 PNMA3Q9UL41 463 aa27.25■■□□□ 1.95
TRAF4-211ENST00000478021 BCRP11274 1271 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 GNAT2P19087 354 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 TDO2P48775 406 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 C16orf86Q6ZW13 317 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 ACER1Q8TDN7 264 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 RILPL2Q969X0 211 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 PTPN22Q9Y2R2 807 aa27.24■■□□□ 1.95
TRAF4-211ENST00000478021 MGAMO43451 1857 aa27.23■■□□□ 1.95
TRAF4-211ENST00000478021 MINDY4BA8MYZ0 360 aa27.23■■□□□ 1.95
TRAF4-211ENST00000478021 AKR1B1P15121 316 aa27.23■■□□□ 1.95
TRAF4-211ENST00000478021 CTGFP29279 349 aa27.23■■□□□ 1.95
TRAF4-211ENST00000478021 PABPC4Q13310 644 aaKnown RBP eCLIP27.23■■□□□ 1.95
TRAF4-211ENST00000478021 GIMAP6Q6P9H5 292 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms