RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 NFICP08651 508 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 ZC3H6P61129 1189 aaKnown RBP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 TTLL4Q14679 1199 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SF3A1Q15459 793 aaKnown RBP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 C4orf46Q504U0 113 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 ZFYVE27Q5T4F4 411 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 WDR78Q5VTH9 848 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 RNF43Q68DV7 783 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 LRFN4Q6PJG9 635 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 PAOXQ6QHF9 649 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SLC51AQ86UW1 340 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SMYD4Q8IYR2 804 aaPredicted RBP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SNRNP27Q8WVK2 155 aaKnown RBP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 RNF34Q969K3 372 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 TRIM44Q96DX7 344 aaPredicted RBP4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 PLPPR2Q96GM1 343 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 RHOVQ96L33 236 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SEMA6CQ9H3T2 930 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 COPRSQ9NQ92 184 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 PICK1Q9NRD5 415 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 SNCAIPQ9Y6H5 919 aa4.51□□□□□ -1.69
FNDC3B-209ENST00000478016 MINDY4BA8MYZ0 360 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 FANCGO15287 622 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 ANP32CO43423 234 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 RNGTTO60942 597 aaKnown RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 PF4P02776 101 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 HCLS1P14317 486 aaPredicted RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 FSTP19883 344 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 NFIAQ12857 509 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 INPP5AQ14642 412 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 NFKBIBQ15653 356 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 WIPI1Q5MNZ9 446 aaPredicted RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 SNAP47Q5SQN1 464 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 NOP9Q86U38 636 aaKnown RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 C12orf40Q86WS4 652 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 RNF214Q8ND24 703 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 CXorf38Q8TB03 319 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 PNISRQ8TF01 805 aaKnown RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 JARID2Q92833 1246 aaPredicted RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 BRINP2Q9C0B6 783 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 FEZ2Q9UHY8 353 aaPredicted RBP4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 SH3BP1Q9Y3L3 701 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 DAGLAQ9Y4D2 1042 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 CSADQ9Y600 493 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 COMMD10Q9Y6G5 202 aa4.5□□□□□ -1.69
FNDC3B-209ENST00000478016 PRAMEF27A3QJZ7 478 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 ADAM23O75077 832 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 BPNT1O95861 308 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 IGLV1-40P01703 118 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 EIF4A3P38919 411 aaKnown RBP4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 RPL6Q02878 288 aaKnown RBP4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 FAM160A1Q05DH4 1040 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 RING1Q06587 406 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 PPM1JQ5JR12 505 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 PRSS36Q5K4E3 855 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 ZBTB37Q5TC79 503 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 BNC2Q6ZN30 1099 aaPredicted RBP4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 CYFIP1Q7L576 1253 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 GOLM1Q8NBJ4 401 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 GATAD2BQ8WXI9 593 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 ISL2Q96A47 359 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 GPATCH3Q96I76 525 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 DBNDD2Q9BQY9 259 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 SSU72Q9NP77 194 aaKnown RBP4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 KCNQ5Q9NR82 932 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 PCOLCE2Q9UKZ9 415 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 TACC3Q9Y6A5 838 aa4.49□□□□□ -1.69
FNDC3B-209ENST00000478016 FAM221AA4D161 298 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 GFRA2O00451 464 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 SH3BP5O60239 455 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 CILPO75339 1184 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 PEX14O75381 377 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 PARNO95453 639 aaKnown RBP4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 F13A1P00488 732 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 NTF4P34130 210 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 CDK8P49336 464 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 CNGB1Q14028 1251 aaPredicted RBP4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 FAM196AQ6ZSG2 479 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 CDC37L1Q7L3B6 337 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 USP48Q86UV5 1035 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 OTUD6BQ8N6M0 293 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 KCT2Q8NC54 265 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 GIMAP7Q8NHV1 300 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 ZNF507Q8TCN5 953 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 ZNF296Q8WUU4 475 aaPredicted RBP4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 PMM1Q92871 262 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 MFSD14AQ96MC6 490 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 WNT10AQ9GZT5 417 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 KLHL42Q9P2K6 505 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 PRKAG2Q9UGJ0 569 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 SUPT16HQ9Y5B9 1047 aaKnown RBP4.48□□□□□ -1.69
FNDC3B-209ENST00000478016 U2SURPO15042 1029 aaKnown RBP4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 DYNC1LI2O43237 492 aaPredicted RBP4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 GARTP22102 1010 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 COPB2P35606 906 aa4.47□□□□□ -1.69
FNDC3B-209ENST00000478016 ETF1P62495 437 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms