RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 RC3H1Q5TC82 1133 aaKnown RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 KRBA2Q6ZNG9 492 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 VPS54Q9P1Q0 977 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 FBXO2Q9UK22 296 aaPredicted RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
MINDY3-206ENST00000477891 EP400Q96L91 3159 aa12.12□□□□□ -0.47
MINDY3-206ENST00000477891 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 RIOK3O14730 519 aaKnown RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 PTPREP23469 700 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 RCAN1P53805 252 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 MDM2Q00987 491 aaPredicted RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 RILPL1Q5EBL4 403 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 IFIT1BQ5T764 474 aaKnown RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 TPTE2Q6XPS3 522 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 NYXQ9GZU5 481 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 BAZ2BQ9UIF8 2168 aaKnown RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 CYP2D6P10635 497 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 CCZ1BP86790 482 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 CNNM3Q8NE01 707 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 RNF26Q9BY78 433 aaPredicted RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 PDCL3Q9H2J4 239 aa12.11□□□□□ -0.47
MINDY3-206ENST00000477891 CCNL1Q9UK58 526 aaPredicted RBP12.11□□□□□ -0.47
MINDY3-206ENST00000477891 SEMA3EO15041 775 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 SMC2O95347 1197 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 SLC4A8Q2Y0W8 1093 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 WNT7AO00755 349 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 POLR2DO15514 142 aaKnown RBP12.1□□□□□ -0.47
MINDY3-206ENST00000477891 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
MINDY3-206ENST00000477891 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 ZNF710Q8N1W2 664 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
MINDY3-206ENST00000477891 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
MINDY3-206ENST00000477891 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
MINDY3-206ENST00000477891 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 RGL2O15211 777 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 TNNT1P13805 278 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 PDE4BQ07343 736 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 GRAMD1CQ8IYS0 662 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 PDILTQ8N807 584 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 PHF20Q9BVI0 1012 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 OSBPL5Q9H0X9 879 aaPredicted RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 IKBKBO14920 756 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 NEMFO60524 1076 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 AKAP17AQ02040 695 aaKnown RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 PPP2R5BQ15173 497 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 TPD52L1Q16890 204 aaPredicted RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 ARMCX5Q6P1M9 558 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 FNBP4Q8N3X1 1017 aaPredicted RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 DPF2Q92785 391 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 CSRNP2Q9H175 543 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 SERTAD1Q9UHV2 236 aa12.09□□□□□ -0.47
MINDY3-206ENST00000477891 SRPRBQ9Y5M8 271 aaKnown RBP12.09□□□□□ -0.47
MINDY3-206ENST00000477891 IRS2Q9Y4H2 1338 aa12.08□□□□□ -0.47
MINDY3-206ENST00000477891 CASZ1Q86V15 1759 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 FANCCQ00597 558 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 NPY5RQ15761 445 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
MINDY3-206ENST00000477891 TRMT1Q9NXH9 659 aaKnown RBP12.08□□□□□ -0.48
MINDY3-206ENST00000477891 DUOX1Q9NRD9 1551 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 MYH13Q9UKX3 1938 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 ZNF831Q5JPB2 1677 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 USP17L8P0C7I0 530 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 NFIXQ14938 502 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 GRIK5Q16478 980 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 PTPN21Q16825 1174 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 CRNKL1Q9BZJ0 848 aaKnown RBP12.08□□□□□ -0.48
MINDY3-206ENST00000477891 ATP8A2Q9NTI2 1148 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 FANCLQ9NW38 375 aa12.08□□□□□ -0.48
MINDY3-206ENST00000477891 NPHP1O15259 732 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 ORC4O43929 436 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 PCP11498 1178 aaKnown RBP12.07□□□□□ -0.48
MINDY3-206ENST00000477891 MYL5Q02045 173 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
MINDY3-206ENST00000477891 EPSTI1Q96J88 318 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 MCM9Q9NXL9 1143 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 IMPACTQ9P2X3 320 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 USP21Q9UK80 565 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
MINDY3-206ENST00000477891 A0A087X0B3 334 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
MINDY3-206ENST00000477891 GSDMDP57764 484 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 POSTNQ15063 836 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 HSP90AA4PQ58FG1 418 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 TMTC3Q6ZXV5 915 aa12.06□□□□□ -0.48
MINDY3-206ENST00000477891 GPR101Q96P66 508 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms