RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 MACROD2A1Z1Q3 448 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 KIF5CO60282 957 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 EIF5P55010 431 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 TRIM28Q13263 835 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 DDB1Q16531 1140 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 METTL16Q86W50 562 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 LCORLQ8N3X6 602 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 CTIFO43310 598 aaKnown RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 ARID5AQ03989 594 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 FILIP1LQ4L180 1135 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CMC1-209ENST00000477739 FAM107BQ9H098 131 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 RSPH14Q9UHP6 348 aa11.11□□□□□ -0.63
CMC1-209ENST00000477739 COL5A2P05997 1499 aaPredicted RBP11.11□□□□□ -0.63
CMC1-209ENST00000477739 CYP19A1P11511 503 aaPredicted RBP11.1□□□□□ -0.63
CMC1-209ENST00000477739 ADD2P35612 726 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 USP5P45974 858 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
CMC1-209ENST00000477739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
CMC1-209ENST00000477739 LPIN2Q92539 896 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 TRIM10Q9UDY6 481 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 ZNF142P52746 1687 aaPredicted RBP11.1□□□□□ -0.63
CMC1-209ENST00000477739 ADAMTSL3P82987 1691 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 SRGAP2O75044 1071 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 CSF1RP07333 972 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 CASP14P31944 242 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 HNRNPH2P55795 449 aaKnown RBP11.1□□□□□ -0.63
CMC1-209ENST00000477739 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 GOLGA6L1Q8N7Z2 621 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 TIGD1Q96MW7 591 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 TANGO6Q9C0B7 1094 aa11.1□□□□□ -0.63
CMC1-209ENST00000477739 CAPN2P17655 700 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 CMA1P23946 247 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 RAD51AP2Q09MP3 1159 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
CMC1-209ENST00000477739 TAF3Q5VWG9 929 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 IFNL3Q8IZI9 196 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 MAN1B1Q9UKM7 699 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 ABL1P00519 1130 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 GOLGA8HP0CJ92 632 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 EIF6P56537 245 aaKnown RBP11.09□□□□□ -0.63
CMC1-209ENST00000477739 RBL2Q08999 1139 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 JADE2Q9NQC1 790 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 C5P01031 1676 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 TRPM3Q9HCF6 1732 aaPredicted RBP11.09□□□□□ -0.63
CMC1-209ENST00000477739 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 CAVIN2O95810 425 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 IDEP14735 1019 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 CCDC152Q4G0S7 254 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 NOSTRINQ8IVI9 506 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 MB21D2Q8IYB1 491 aaPredicted RBP11.09□□□□□ -0.63
CMC1-209ENST00000477739 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
CMC1-209ENST00000477739 PARD6BQ9BYG5 372 aa11.09□□□□□ -0.63
CMC1-209ENST00000477739 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
CMC1-209ENST00000477739 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
CMC1-209ENST00000477739 PP2D1A8MPX8 630 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 YEATS4O95619 227 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 SLFN14P0C7P3 912 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 GPS2Q13227 327 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 SUSD4Q5VX71 490 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 ATL3Q6DD88 541 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 PHRF1Q9P1Y6 1649 aaKnown RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 JCADQ9P266 1359 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 N4BP1O75113 896 aaKnown RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 KIF20AO95235 890 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 UBXN1Q04323 297 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 UBN2Q6ZU65 1347 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 TRIM75PA6NK02 468 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 TSPY2A6NKD2 308 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 IPO7O95373 1038 aaKnown RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 IL6STP40189 918 aaPredicted RBP11.08□□□□□ -0.64
CMC1-209ENST00000477739 CHMP4BP1P59074 171 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 NYAP1Q6ZVC0 841 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 SLC4A9Q96Q91 983 aa11.08□□□□□ -0.64
CMC1-209ENST00000477739 CLSTN1O94985 981 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 CCDC175P0C221 793 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 UBE3CQ15386 1083 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 SLC35F6Q8N357 371 aa11.07□□□□□ -0.64
CMC1-209ENST00000477739 SYMPKQ92797 1274 aaKnown RBP11.07□□□□□ -0.64
CMC1-209ENST00000477739 GPR101Q96P66 508 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms