RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 FSD1Q9BTV5 496 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 CFHR5Q9BXR6 569 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 ATP8A2Q9NTI2 1148 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
NIFK-205ENST00000477693 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
NIFK-205ENST00000477693 HIP1O00291 1037 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 IGF2BP3O00425 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
NIFK-205ENST00000477693 TRPA1O75762 1119 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 SNAPC2Q13487 334 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
NIFK-205ENST00000477693 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
NIFK-205ENST00000477693 PICK1Q9NRD5 415 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 SERPINB13Q9UIV8 391 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 DOCK1Q14185 1865 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
NIFK-205ENST00000477693 CCL15-CCL14A0A0B4J2E2 113 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 PRKAB2O43741 272 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 POLR3DP05423 398 aaPredicted RBP11.73□□□□□ -0.53
NIFK-205ENST00000477693 CETPP11597 493 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 MYH1P12882 1939 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 CAP2P40123 477 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 PLCD1P51178 756 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 GABPAQ06546 454 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 RRP1BQ14684 758 aaKnown RBP11.73□□□□□ -0.53
NIFK-205ENST00000477693 CCL15Q16663 113 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 ZMYM1Q5SVZ6 1142 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 TATDN1Q6P1N9 297 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 BRI3BPQ8WY22 251 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 PTPN18Q99952 460 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 TRIM34Q9BYJ4 488 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 GINM1Q9NU53 330 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 MCM9Q9NXL9 1143 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
NIFK-205ENST00000477693 M0R2C6 588 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 CXCL11O14625 94 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 GPAA1O43292 621 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 CDC45O75419 566 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 GNAT2P19087 354 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 NOM1Q5C9Z4 860 aaKnown RBP11.72□□□□□ -0.53
NIFK-205ENST00000477693 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
NIFK-205ENST00000477693 SLC4A4Q9Y6R1 1079 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 ZHX2Q9Y6X8 837 aa11.72□□□□□ -0.53
NIFK-205ENST00000477693 A0A0G2JLL6 359 aaPredicted RBP11.71□□□□□ -0.53
NIFK-205ENST00000477693 GSG1L2A8MUP6 293 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 MAP3K13O43283 966 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.53
NIFK-205ENST00000477693 ASNSP08243 561 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 SDSP20132 328 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 PRRT2Q7Z6L0 340 aaPredicted RBP11.71□□□□□ -0.53
NIFK-205ENST00000477693 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 BACH2Q9BYV9 841 aa11.71□□□□□ -0.53
NIFK-205ENST00000477693 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
NIFK-205ENST00000477693 PHIPQ8WWQ0 1821 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 USP17L5A8MUK1 530 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 TRIM6-TRIM34B2RNG4 842 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 BTBD19C9JJ37 291 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 TBC1D8O95759 1140 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 GSPT1P15170 499 aaKnown RBP11.7□□□□□ -0.54
NIFK-205ENST00000477693 SHMT1P34896 483 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 MOGSQ13724 837 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 SBK1Q52WX2 424 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 C12orf60Q5U649 245 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 CTR9Q6PD62 1173 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 AMOTL1Q8IY63 956 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 FAM43AQ8N2R8 423 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 RUFY2Q8WXA3 655 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
NIFK-205ENST00000477693 UPF2Q9HAU5 1272 aaKnown RBP11.7□□□□□ -0.54
NIFK-205ENST00000477693 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 ARPP21Q9UBL0 812 aaPredicted RBP11.7□□□□□ -0.54
NIFK-205ENST00000477693 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 ZBTB21Q9ULJ3 1066 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 ATAD5Q96QE3 1844 aa11.7□□□□□ -0.54
NIFK-205ENST00000477693 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 USP17L12C9JPN9 530 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 USP17L21D6R901 530 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 GDF11O95390 407 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 CYP2D6P10635 497 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 JAG1P78504 1218 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 SHROOM1Q2M3G4 852 aaPredicted RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 ANKRD23Q86SG2 305 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 CCDC84Q86UT8 332 aaPredicted RBP11.69□□□□□ -0.54
NIFK-205ENST00000477693 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 ZNF280CQ8ND82 737 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 FAM212AQ96EL1 285 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 WDR18Q9BV38 432 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 R3HDMLQ9H3Y0 253 aa11.69□□□□□ -0.54
NIFK-205ENST00000477693 AS3MTQ9HBK9 375 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms