RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TOM1L2Q6ZVM7 507 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 CBLL1Q75N03 491 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 TTC21BQ7Z4L5 1316 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 RGL4Q8IZJ4 473 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 KCNF1Q9H3M0 494 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 FAM13BQ9NYF5 915 aa6.63□□□□□ -1.35
CKS1B-207ENST00000477676 PPP1R1BQ9UD71 204 aaPredicted RBP6.63□□□□□ -1.35
CKS1B-207ENST00000477676 PCNTO95613 3336 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 DDX3YO15523 660 aaKnown RBP6.62□□□□□ -1.35
CKS1B-207ENST00000477676 CDC25BP30305 580 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 TXNRD1Q16881 649 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 CARD10Q9BWT7 1032 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 LACRTQ9GZZ8 138 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 ANGEL1Q9UNK9 670 aaKnown RBP6.62□□□□□ -1.35
CKS1B-207ENST00000477676 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 LY75O60449 1722 aa6.62□□□□□ -1.35
CKS1B-207ENST00000477676 ABCC6O95255 1503 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 CD163L1Q9NR16 1453 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 SART1O43290 800 aaKnown RBP6.61□□□□□ -1.35
CKS1B-207ENST00000477676 CDC27P30260 824 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 SLC15A2Q16348 729 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 MYO19Q96H55 970 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 SYT17Q9BSW7 474 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
CKS1B-207ENST00000477676 DOT1LQ8TEK3 1739 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 FSCN2O14926 492 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 ZNF827Q17R98 1081 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-207ENST00000477676 UBASH3BQ8TF42 649 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
CKS1B-207ENST00000477676 MFSD14AQ96MC6 490 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 CCDC39Q9UFE4 941 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 FAM208AQ9UK61 1670 aaKnown RBP6.6□□□□□ -1.35
CKS1B-207ENST00000477676 TAF1LQ8IZX4 1826 aa6.6□□□□□ -1.35
CKS1B-207ENST00000477676 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 ADAM11O75078 769 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 ITGB5P18084 799 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 WEE1P30291 646 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 ATP11AP98196 1134 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 CEP135Q66GS9 1140 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 NFXL1Q6ZNB6 911 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 KLHL23Q8NBE8 558 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 SIN3AQ96ST3 1273 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 LRFN2Q9ULH4 789 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 LEMD3Q9Y2U8 911 aa6.59□□□□□ -1.35
CKS1B-207ENST00000477676 SBNO2Q9Y2G9 1366 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 EXOC5O00471 708 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 PREPP48147 710 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 COL19A1Q14993 1142 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
CKS1B-207ENST00000477676 NME9Q86XW9 330 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 KLHDC7BQ96G42 594 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 SPACA7Q96KW9 195 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 MTFR1LQ9H019 292 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 ATG3Q9NT62 314 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 STK32BQ9NY57 414 aa6.58□□□□□ -1.36
CKS1B-207ENST00000477676 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 KTN1Q86UP2 1357 aaKnown RBP6.57□□□□□ -1.36
CKS1B-207ENST00000477676 CCDC7Q96M83 1385 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 MAP3K5Q99683 1374 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 ITGB4P16144 1822 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 EVC2Q86UK5 1308 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 TTC21AQ8NDW8 1320 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 JUNBP17275 347 aaPredicted RBP6.57□□□□□ -1.36
CKS1B-207ENST00000477676 BRD2P25440 801 aaKnown RBP6.57□□□□□ -1.36
CKS1B-207ENST00000477676 SWI5Q1ZZU3 235 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 ANKRD34AQ69YU3 496 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 FAM117BQ6P1L5 589 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 TP53INP2Q8IXH6 220 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 FNDC3AQ9Y2H6 1198 aaKnown RBP6.57□□□□□ -1.36
CKS1B-207ENST00000477676 NSD2O96028 1365 aa6.57□□□□□ -1.36
CKS1B-207ENST00000477676 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKS1B-207ENST00000477676 PRNPP04156 253 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 F13BP05160 661 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 FOSL1P15407 271 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 FBLN7Q53RD9 439 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.56□□□□□ -1.36
CKS1B-207ENST00000477676 FBXL6Q8N531 539 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 KCNH5Q8NCM2 988 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 GIMAP7Q8NHV1 300 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 PIK3R5Q8WYR1 880 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 ARXQ96QS3 562 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 SH2B1Q9NRF2 756 aaPredicted RBP6.56□□□□□ -1.36
CKS1B-207ENST00000477676 HIF3AQ9Y2N7 669 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 TOGARAM1Q9Y4F4 1720 aa6.56□□□□□ -1.36
CKS1B-207ENST00000477676 PNPLA7Q6ZV29 1317 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 EPHA1P21709 976 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 FBLN1P23142 703 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 MAP4P27816 1152 aaKnown RBP6.55□□□□□ -1.36
CKS1B-207ENST00000477676 C1QTNF8P60827 252 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 HYAL2Q12891 473 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms