RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 TREML2Q5T2D2 321 aa9.5□□□□□ -0.89
RBBP4-211ENST00000477563 DIS3LQ8TF46 1054 aaKnown RBP9.5□□□□□ -0.89
RBBP4-211ENST00000477563 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
RBBP4-211ENST00000477563 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
RBBP4-211ENST00000477563 MORF4L1Q9UBU8 362 aa9.5□□□□□ -0.89
RBBP4-211ENST00000477563 SIPA1L1O43166 1804 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 FOCADQ5VW36 1801 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 TRIM75PA6NK02 468 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 SLURP2P0DP57 97 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 PABPC4Q13310 644 aaKnown RBP eCLIP9.49□□□□□ -0.89
RBBP4-211ENST00000477563 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 TDHQ8IZJ6 230 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 ZNF280CQ8ND82 737 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 ZNF384Q8TF68 577 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 HMX1Q9NP08 348 aaPredicted RBP9.49□□□□□ -0.89
RBBP4-211ENST00000477563 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 MROH7-TTC4A0A0A0MT08 1334 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 ZBED9Q6R2W3 1325 aa9.49□□□□□ -0.89
RBBP4-211ENST00000477563 COL6A1P12109 1028 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 XRCC5P13010 732 aaKnown RBP9.48□□□□□ -0.89
RBBP4-211ENST00000477563 HOXA7P31268 230 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-211ENST00000477563 CAP2P40123 477 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 BTDP43251 543 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 SPTY2D1Q68D10 685 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-211ENST00000477563 ZSCAN29Q8IWY8 852 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-211ENST00000477563 DEFB123Q8N688 67 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 SSH1Q8WYL5 1049 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 ARHGAP45Q92619 1136 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 C11orf49Q9H6J7 331 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 MTMR10Q9NXD2 777 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
RBBP4-211ENST00000477563 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
RBBP4-211ENST00000477563 CDH23Q9H251 3354 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 MAST2Q6P0Q8 1798 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 MAGEA10P43363 369 aaPredicted RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 TRIM32Q13049 653 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 SPP2Q13103 211 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 CCDC84Q86UT8 332 aaPredicted RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 METTL16Q86W50 562 aaKnown RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 DZIP1Q86YF9 867 aaKnown RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 TRMT44Q8IYL2 757 aaKnown RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 C7orf61Q8IZ16 206 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 TRIB2Q92519 343 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 WDR18Q9BV38 432 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
RBBP4-211ENST00000477563 PFASO15067 1338 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 MUC3AQ02505 3323 aa9.47□□□□□ -0.89
RBBP4-211ENST00000477563 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 ST18O60284 1047 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 ADORA1P30542 326 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 TIMM10P62072 90 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 MECOMQ03112 1051 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 PICALMQ13492 652 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 RRP1BQ14684 758 aaKnown RBP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 FAM109BQ6ICB4 259 aaPredicted RBP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 SOCS4Q8WXH5 440 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 USP6NLQ92738 828 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 NSUN4Q96CB9 384 aaKnown RBP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 API5Q9BZZ5 524 aaKnown RBP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 SIL1Q9H173 461 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 ZMYND8Q9ULU4 1186 aaPredicted RBP9.46□□□□□ -0.9
RBBP4-211ENST00000477563 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
RBBP4-211ENST00000477563 SNPHO15079 494 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 LDHCP07864 332 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 UBTFL1P0CB47 393 aaPredicted RBP9.45□□□□□ -0.9
RBBP4-211ENST00000477563 RARSP54136 660 aaKnown RBP9.45□□□□□ -0.9
RBBP4-211ENST00000477563 HMGCS2P54868 508 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 GSTO1P78417 241 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 Q7L0L9 218 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 AS3MTQ9HBK9 375 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 GINM1Q9NU53 330 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 ABCF2Q9UG63 623 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 LTBP2Q14767 1821 aa9.45□□□□□ -0.9
RBBP4-211ENST00000477563 A0A1B0GUL7 405 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 C19orf81C9J6K1 198 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 STK25O00506 426 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 IGSF3O75054 1194 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 SYN1P17600 705 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 BACE1P56817 501 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
RBBP4-211ENST00000477563 MTX1Q13505 466 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 MVPQ14764 893 aaKnown RBP9.44□□□□□ -0.9
RBBP4-211ENST00000477563 GPRC5AQ8NFJ5 357 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 GTF3C2Q8WUA4 911 aaPredicted RBP9.44□□□□□ -0.9
RBBP4-211ENST00000477563 XAGE2Q96GT9 111 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 NUDT12Q9BQG2 462 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 DHX36Q9H2U1 1008 aaKnown RBP9.44□□□□□ -0.9
RBBP4-211ENST00000477563 HMG20BQ9P0W2 317 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 PI4KBQ9UBF8 816 aa9.44□□□□□ -0.9
RBBP4-211ENST00000477563 PA2G4Q9UQ80 394 aaKnown RBP9.44□□□□□ -0.9
RBBP4-211ENST00000477563 RLFQ13129 1914 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms