RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 ESR2Q92731 530 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 NEK1Q96PY6 1258 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 FZD1Q9UP38 647 aa19.13■□□□□ 0.65
VHL-203ENST00000477538 PHF20L1A8MW92 1017 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 PPP1R12BO60237 982 aaPredicted RBP19.12■□□□□ 0.65
VHL-203ENST00000477538 KDM4AO75164 1064 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 CASTP20810 708 aaKnown RBP19.12■□□□□ 0.65
VHL-203ENST00000477538 NT5C2P49902 561 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 FAM47AQ5JRC9 791 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 MB21D2Q8IYB1 491 aaPredicted RBP19.12■□□□□ 0.65
VHL-203ENST00000477538 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 CCDC17Q96LX7 622 aa19.12■□□□□ 0.65
VHL-203ENST00000477538 PLIN4Q96Q06 1357 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 TSPY2A6NKD2 308 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 USP2O75604 605 aaPredicted RBP19.11■□□□□ 0.65
VHL-203ENST00000477538 GDF11O95390 407 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 AKR1B1P15121 316 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 TTLL12Q14166 644 aaPredicted RBP19.11■□□□□ 0.65
VHL-203ENST00000477538 RRP1BQ14684 758 aaKnown RBP19.11■□□□□ 0.65
VHL-203ENST00000477538 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 WRNIP1Q96S55 665 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 TM6SF1Q9BZW5 370 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 ZNF112Q9UJU3 913 aa19.11■□□□□ 0.65
VHL-203ENST00000477538 ANGEL1Q9UNK9 670 aaKnown RBP19.11■□□□□ 0.65
VHL-203ENST00000477538 MPHOSPH10O00566 681 aaKnown RBP19.1■□□□□ 0.65
VHL-203ENST00000477538 CELF2O95319 508 aaKnown RBP19.1■□□□□ 0.65
VHL-203ENST00000477538 HMGB1P09429 215 aaKnown RBP19.1■□□□□ 0.65
VHL-203ENST00000477538 TSPY3P0CV98 308 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 TSPY8P0CW00 308 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 IREB2P48200 963 aaKnown RBP19.1■□□□□ 0.65
VHL-203ENST00000477538 TFAP4Q01664 338 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 COL9A3Q14050 684 aaPredicted RBP19.1■□□□□ 0.65
VHL-203ENST00000477538 ABCB5Q2M3G0 1257 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 BLOC1S2Q6QNY1 142 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 CYB5R4Q7L1T6 521 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 KIF2CQ99661 725 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 ZSWIM5Q9P217 1185 aa19.1■□□□□ 0.65
VHL-203ENST00000477538 PASKQ96RG2 1323 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
VHL-203ENST00000477538 CPA1P15085 419 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 INPP5BP32019 993 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 MCM5P33992 734 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 CAP2P40123 477 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 MOB2Q70IA6 237 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 ARMC9Q7Z3E5 817 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.09■□□□□ 0.65
VHL-203ENST00000477538 NEDD1Q8NHV4 660 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 UPF3BQ9BZI7 483 aaKnown RBP19.09■□□□□ 0.65
VHL-203ENST00000477538 ZSWIM6Q9HCJ5 1215 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 CABP5Q9NP86 173 aa19.09■□□□□ 0.65
VHL-203ENST00000477538 PRC1O43663 620 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 GH2P01242 217 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 ANTXR2P58335 489 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 FKBP1BP68106 108 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 FSTL1Q12841 308 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 MAP3K11Q16584 847 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 SHROOM1Q2M3G4 852 aaPredicted RBP19.08■□□□□ 0.64
VHL-203ENST00000477538 TMEM179Q6ZVK1 233 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 RUFY3Q7L099 469 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 DHX32Q7L7V1 743 aaKnown RBP19.08■□□□□ 0.64
VHL-203ENST00000477538 CHST3Q7LGC8 479 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 IQCA1Q86XH1 822 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 GBA2Q9HCG7 927 aaPredicted RBP19.08■□□□□ 0.64
VHL-203ENST00000477538 ZBTB21Q9ULJ3 1066 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 CYP46A1Q9Y6A2 500 aa19.08■□□□□ 0.64
VHL-203ENST00000477538 RPS6KB1P23443 525 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 JAG1P78504 1218 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 SCYL3Q8IZE3 742 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 C2orf69Q8N8R5 385 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 ZKSCAN4Q969J2 545 aaPredicted RBP19.07■□□□□ 0.64
VHL-203ENST00000477538 ZKSCAN3Q9BRR0 538 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
VHL-203ENST00000477538 WDR19Q8NEZ3 1342 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 ASNSP08243 561 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 EXOSC10Q01780 885 aaKnown RBP19.06■□□□□ 0.64
VHL-203ENST00000477538 SEPT2Q15019 361 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 RABEP1Q15276 862 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 NOL9Q5SY16 702 aaKnown RBP19.06■□□□□ 0.64
VHL-203ENST00000477538 CST9Q5W186 159 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.06■□□□□ 0.64
VHL-203ENST00000477538 TCEANC2Q96MN5 208 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.06■□□□□ 0.64
VHL-203ENST00000477538 TCP11L1Q9NUJ3 509 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 CSADQ9Y600 493 aa19.06■□□□□ 0.64
VHL-203ENST00000477538 TNKSO95271 1327 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 IGKV6D-41A0A0C4DH26 115 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 UBE2Q2LH0YL09 131 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 NMT2O60551 498 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 GUCY1A2P33402 732 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 VGLL4Q14135 290 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 SART3Q15020 963 aaKnown RBP19.05■□□□□ 0.64
VHL-203ENST00000477538 RAB3GAP1Q15042 981 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 ANKRD13AQ8IZ07 590 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 CEP95Q96GE4 821 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 TMEM87BQ96K49 555 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 ZSCAN10Q96SZ4 725 aaPredicted RBP19.05■□□□□ 0.64
VHL-203ENST00000477538 MTA3Q9BTC8 594 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 LRRC2Q9BYS8 371 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms