RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-204ENST00000477421 ACBD3Q9H3P7 528 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 MYO1BO43795 1136 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 MCM6Q14566 821 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 CCDC40Q4G0X9 1142 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-204ENST00000477421 MMRN2Q9H8L6 949 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 GUCA1BQ9UMX6 200 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 USP42Q9H9J4 1324 aaKnown RBP12.5□□□□□ -0.41
COL27A1-204ENST00000477421 ERLIN1O75477 346 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 TDRD7Q8NHU6 1098 aaKnown RBP12.5□□□□□ -0.41
COL27A1-204ENST00000477421 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
COL27A1-204ENST00000477421 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-204ENST00000477421 TXKP42681 527 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.49□□□□□ -0.41
COL27A1-204ENST00000477421 CDCA7Q9BWT1 371 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-204ENST00000477421 TMOD2Q9NZR1 351 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 PXDNQ92626 1479 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 SH2B2O14492 632 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-204ENST00000477421 AKR1B10O60218 316 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 CCDC175P0C221 793 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 ZNF569Q5MCW4 686 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 TAB2Q9NYJ8 693 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 NEDD4P46934 1319 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 CDC27P30260 824 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
COL27A1-204ENST00000477421 ZNF215Q9UL58 517 aaPredicted RBP12.49□□□□□ -0.41
COL27A1-204ENST00000477421 HLA-DOAP06340 250 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 RAD51AP2Q09MP3 1159 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 TCP10Q12799 353 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 KRBA2Q6ZNG9 492 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 RRP36Q96EU6 259 aaKnown RBP12.48□□□□□ -0.41
COL27A1-204ENST00000477421 CARD6Q9BX69 1037 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 C6orf50Q9HD87 102 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 RBM28Q9NW13 759 aaKnown RBP12.48□□□□□ -0.41
COL27A1-204ENST00000477421 PCDHB6Q9Y5E3 794 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 CASP1P29466 404 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 AMPD3Q01432 767 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 PTGDRQ13258 359 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL27A1-204ENST00000477421 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 FAM170AA1A519 330 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-204ENST00000477421 SENP2Q9HC62 589 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 RMND1Q9NWS8 449 aa12.48□□□□□ -0.41
COL27A1-204ENST00000477421 CCNT1O60563 726 aaKnown RBP12.47□□□□□ -0.41
COL27A1-204ENST00000477421 PARP1P09874 1014 aaKnown RBP12.47□□□□□ -0.41
COL27A1-204ENST00000477421 ARID4AP29374 1257 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-204ENST00000477421 MLKLQ8NB16 471 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 CSRNP2Q9H175 543 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 RIPOR2Q9Y4F9 1068 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 SOS2Q07890 1332 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-204ENST00000477421 RHOXF2BP0C7M4 288 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 GTF2IP78347 998 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 CTAGE1Q96RT6 745 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 RHOXF2Q9BQY4 288 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 A0A1W2PQ27 194 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 A0A1W2PQ64 194 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 A0A1W2PQD8 194 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 AKR1B15C9JRZ8 316 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-204ENST00000477421 PRDX5P30044 214 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 INF2Q27J81 1249 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 DYMQ7RTS9 669 aa12.47□□□□□ -0.41
COL27A1-204ENST00000477421 USP17L8P0C7I0 530 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.41
COL27A1-204ENST00000477421 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.41
COL27A1-204ENST00000477421 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
COL27A1-204ENST00000477421 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 MRFAP1L1Q96HT8 127 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 TSG101Q99816 390 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 USP21Q9UK80 565 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 SYNRGQ9UMZ2 1314 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 KIF28PB7ZC32 967 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 NMT2O60551 498 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 TAF3Q5VWG9 929 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
COL27A1-204ENST00000477421 EPSTI1Q96J88 318 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 CCDC94Q9BW85 323 aaPredicted RBP12.46□□□□□ -0.41
COL27A1-204ENST00000477421 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
COL27A1-204ENST00000477421 GOLGA6L9A6NEM1 432 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 UBE2Q2LH0YL09 131 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 PHACTR2O75167 634 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 SPAG1Q07617 926 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 CCDC144BQ3MJ40 725 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 CPVLQ9H3G5 476 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 GGA1Q9UJY5 639 aa12.46□□□□□ -0.42
COL27A1-204ENST00000477421 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 PDE4DQ08499 809 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 NAA30Q147X3 362 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 PLEKHA8P1O95397 391 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 CYP2D6P10635 497 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 GNA11P29992 359 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms