RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GSG1L2A8MUP6 293 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 BTBD19C9JJ37 291 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 SHMT1P34896 483 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 BACE1P56817 501 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 PABPC4Q13310 644 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 CERKLQ49MI3 558 aaPredicted RBP14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 ZNF287Q9HBT7 754 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 ROBO3Q96MS0 1386 aa14.81□□□□□ -0.04
CLCNKA-205ENST00000477360 MYH1P12882 1939 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 FAM196BA6NMK8 535 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 USP17L21D6R901 530 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 TLR2O60603 784 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 FKTNO75072 461 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 TBC1D8O95759 1140 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 MFAP1P55081 439 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 CRHR2Q13324 411 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 RRP1BQ14684 758 aaKnown RBP14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 ARHGEF6Q15052 776 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 FAM43AQ8N2R8 423 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 CCDC136Q96JN2 1154 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 CABP5Q9NP86 173 aa14.8□□□□□ -0.04
CLCNKA-205ENST00000477360 USP17L10C9JJH3 530 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 PRKAB2O43741 272 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 ZMYM6O95789 1325 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 NT5C2P49902 561 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 TAF1CQ15572 869 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 ALX1Q15699 326 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 ABCB5Q2M3G0 1257 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 SLFNL1Q499Z3 407 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 NAV1Q8NEY1 1877 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 ZNF296Q8WUU4 475 aaPredicted RBP14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 C12orf42Q96LP6 360 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 PARK7Q99497 189 aaKnown RBP14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 PNMA3Q9UL41 463 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 AGTPBP1Q9UPW5 1226 aa14.79□□□□□ -0.04
CLCNKA-205ENST00000477360 M0R2C6 588 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 PDHXO00330 501 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 GNRH1P01148 92 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 CHGBP05060 677 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 USP14P54578 494 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 SPP2Q13103 211 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 GPAT2Q6NUI2 795 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 TMEM179Q6ZVK1 233 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 CTU1Q7Z7A3 348 aaKnown RBP14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 TNS4Q8IZW8 715 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 ERO1AQ96HE7 468 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 TSKSQ9UJT2 592 aa14.78□□□□□ -0.04
CLCNKA-205ENST00000477360 ADGRA2Q96PE1 1338 aa14.77□□□□□ -0.04
CLCNKA-205ENST00000477360 TRIM75PA6NK02 468 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 GH2P01242 217 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 SLURP2P0DP57 97 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 HOXA7P31268 230 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 SP3Q02447 781 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 IFNL3Q8IZI9 196 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 KIAA1683Q9H0B3 1180 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.05
CLCNKA-205ENST00000477360 PHIPQ8WWQ0 1821 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 SLC3A2P08195 630 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 SDSP20132 328 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 TDO2P48775 406 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 CDK8P49336 464 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 USP17L2Q6R6M4 530 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 C17orf99Q6UX52 265 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 GTF3C2Q8WUA4 911 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 SH2D4AQ9H788 454 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 EPB41L4AQ9HCS5 686 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 TMOD4Q9NZQ9 345 aa14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-205ENST00000477360 GDF11O95390 407 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 APPP05067 770 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 PDE4AP27815 886 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 GCLCP48506 637 aaPredicted RBP14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 JAG1P78504 1218 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 PPP4R3BQ5MIZ7 849 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 TTC22Q5TAA0 569 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 NAPBQ9H115 298 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 R3HDMLQ9H3Y0 253 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 KANSL2Q9H9L4 492 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 ANAPC4Q9UJX5 808 aa14.75□□□□□ -0.05
CLCNKA-205ENST00000477360 CCDC171Q6TFL3 1326 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 CYP2D6P10635 497 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 HMGCS2P54868 508 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 PRMT2P55345 433 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 PDE4BQ07343 736 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 GADL1Q6ZQY3 521 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 LPAR1Q92633 364 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 RILPL2Q969X0 211 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 SEC62Q99442 399 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 LOC285556D6RIA3 1793 aa14.74□□□□□ -0.05
CLCNKA-205ENST00000477360 ATAD5Q96QE3 1844 aa14.73□□□□□ -0.05
CLCNKA-205ENST00000477360 RAD50Q92878 1312 aa14.73□□□□□ -0.05
CLCNKA-205ENST00000477360 PTPRFP10586 1907 aa14.73□□□□□ -0.05
CLCNKA-205ENST00000477360 FGRP09769 529 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms