RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 RASA1P20936 1047 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 GUCY1A2P33402 732 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 VEGFBP49765 207 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
COPS3-207ENST00000477299 CLEC10AQ8IUN9 316 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 AMOTL1Q8IY63 956 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 DNAJC5GQ8N7S2 189 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 ANAPC4Q9UJX5 808 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
COPS3-207ENST00000477299 ZMYM6O95789 1325 aa18.9■□□□□ 0.62
COPS3-207ENST00000477299 GREB1LQ9C091 1923 aaPredicted RBP18.9■□□□□ 0.62
COPS3-207ENST00000477299 GH2P01242 217 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 NOL9Q5SY16 702 aaKnown RBP18.89■□□□□ 0.61
COPS3-207ENST00000477299 CASC1Q6TDU7 716 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 SCYL3Q8IZE3 742 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 OPTNQ96CV9 577 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 WNK4Q96J92 1243 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 CAPNS2Q96L46 248 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
COPS3-207ENST00000477299 CSADQ9Y600 493 aa18.89■□□□□ 0.61
COPS3-207ENST00000477299 CYP21A2P08686 494 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 SLC10A3P09131 477 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 PTPRAP18433 802 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 COL9A3Q14050 684 aaPredicted RBP18.88■□□□□ 0.61
COPS3-207ENST00000477299 SEPT2Q15019 361 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 FAM47AQ5JRC9 791 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 KIAA1211Q6ZU35 1233 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 OTUD5Q96G74 571 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.88■□□□□ 0.61
COPS3-207ENST00000477299 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 ZBTB21Q9ULJ3 1066 aa18.88■□□□□ 0.61
COPS3-207ENST00000477299 SPDYE5A6NIY4 337 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 MPHOSPH10O00566 681 aaKnown RBP18.87■□□□□ 0.61
COPS3-207ENST00000477299 ZNF213O14771 459 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 DGKZQ13574 1117 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 ABCB5Q2M3G0 1257 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 C8orf34Q49A92 452 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 SPRYD7Q5W111 196 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 STOX1Q6ZVD7 989 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 HHIPL1Q96JK4 782 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 MKNK2Q9HBH9 465 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 ZHX2Q9Y6X8 837 aa18.87■□□□□ 0.61
COPS3-207ENST00000477299 MYH4Q9Y623 1939 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 NEDD4P46934 1319 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 WDR33Q9C0J8 1336 aaKnown RBP18.86■□□□□ 0.61
COPS3-207ENST00000477299 IRF6O14896 467 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 FGRP09769 529 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 NECTIN1Q15223 517 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 RRP12Q5JTH9 1297 aaKnown RBP18.86■□□□□ 0.61
COPS3-207ENST00000477299 ERO1BQ86YB8 467 aa18.86■□□□□ 0.61
COPS3-207ENST00000477299 U3KPZ7 1027 aaPredicted RBP18.86■□□□□ 0.61
COPS3-207ENST00000477299 UNCXA6NJT0 531 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 SLC27A2O14975 620 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 AKNAD1Q5T1N1 836 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 SIAH1Q8IUQ4 282 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 PICK1Q9NRD5 415 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
COPS3-207ENST00000477299 NMT2O60551 498 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 TFAP4Q01664 338 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 KIF23Q02241 960 aaPredicted RBP18.84■□□□□ 0.61
COPS3-207ENST00000477299 PDE4BQ07343 736 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
COPS3-207ENST00000477299 CREB3L3Q68CJ9 461 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 ACER1Q8TDN7 264 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 TOMM22Q9NS69 142 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 AFG3L2Q9Y4W6 797 aa18.84■□□□□ 0.61
COPS3-207ENST00000477299 USP17L5A8MUK1 530 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 ORC4O43929 436 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 SLC3A2P08195 630 aaKnown RBP18.83■□□□□ 0.6
COPS3-207ENST00000477299 PPATQ06203 517 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 SPP2Q13103 211 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 ZNF444Q8N0Y2 327 aaPredicted RBP18.83■□□□□ 0.6
COPS3-207ENST00000477299 CCDC102AQ96A19 550 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 MS4A4AQ96JQ5 239 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 USP26Q9BXU7 913 aa18.83■□□□□ 0.6
COPS3-207ENST00000477299 A0A1W2PRG0 241 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 TRIM75PA6NK02 468 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 B4E1Z4 1266 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 E7EWF7 191 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 RANBP6O60518 1105 aaKnown RBP18.82■□□□□ 0.6
COPS3-207ENST00000477299 ASNSP08243 561 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 ECE1P42892 770 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 PPIL2Q13356 520 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
COPS3-207ENST00000477299 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 MOGSQ13724 837 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 NEDD1Q8NHV4 660 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 CCDC17Q96LX7 622 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 PTPN18Q99952 460 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
COPS3-207ENST00000477299 KDM4AO75164 1064 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 ZBTB48P10074 688 aaPredicted RBP18.8■□□□□ 0.6
COPS3-207ENST00000477299 ZYXQ15942 572 aaKnown RBP18.8■□□□□ 0.6
COPS3-207ENST00000477299 KIAA1755Q5JYT7 1200 aa18.8■□□□□ 0.6
COPS3-207ENST00000477299 TMEM179Q6ZVK1 233 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms