RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TUBB4BP68371 445 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
VARS2-209ENST00000477288 PIK3C2GO75747 1445 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 GLT8D2Q9H1C3 349 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 ERCC3P19447 782 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 PLEKHM2Q8IWE5 1019 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 UBL4BQ8N7F7 174 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 SNX29Q8TEQ0 813 aa20.67■□□□□ 0.9
VARS2-209ENST00000477288 CETN3O15182 167 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 C8orf74Q6P047 294 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 RSRC1Q96IZ7 334 aaKnown RBP20.66■□□□□ 0.9
VARS2-209ENST00000477288 DBNDD2Q9BQY9 259 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
VARS2-209ENST00000477288 IGSF3O75054 1194 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 XRCC6P12956 609 aaKnown RBP eCLIP20.66■□□□□ 0.9
VARS2-209ENST00000477288 GPAA1O43292 621 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 PDE6BP35913 854 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 CASC4Q6P4E1 433 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 CSGALNACT2Q8N6G5 542 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 TBX22Q9Y458 520 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 A0A1W2PP64 1363 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 EVCP57679 992 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 RAD51AP2Q09MP3 1159 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 EP400NLQ6ZTU2 488 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 NSMCE1Q8WV22 266 aa20.66■□□□□ 0.9
VARS2-209ENST00000477288 TRPM2O94759 1503 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 ACTN4O43707 911 aaKnown RBP20.65■□□□□ 0.9
VARS2-209ENST00000477288 TTC38Q5R3I4 469 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 APBA3O96018 575 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 BEND3Q5T5X7 828 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 C10orf67Q8IYJ2 551 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 CEP120Q8N960 986 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 TGFBRAP1Q8WUH2 860 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 PRPF6O94906 941 aaKnown RBP20.65■□□□□ 0.9
VARS2-209ENST00000477288 GSDMBQ8TAX9 411 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 SLC27A2O14975 620 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 CD19P15391 556 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 AFAP1L2Q8N4X5 818 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 MIPOL1Q8TD10 442 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 DNM3Q9UQ16 869 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 DLGAP5Q15398 846 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 LONRF3Q496Y0 759 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 ANO3Q9BYT9 981 aa20.65■□□□□ 0.9
VARS2-209ENST00000477288 NCOA5Q9HCD5 579 aaKnown RBP20.65■□□□□ 0.9
VARS2-209ENST00000477288 PZPP20742 1482 aa20.64■□□□□ 0.9
VARS2-209ENST00000477288 CEP128Q6ZU80 1094 aa20.64■□□□□ 0.9
VARS2-209ENST00000477288 LRWD1Q9UFC0 647 aa20.64■□□□□ 0.9
VARS2-209ENST00000477288 KCNH3Q9ULD8 1083 aa20.64■□□□□ 0.9
VARS2-209ENST00000477288 STK24Q9Y6E0 443 aa20.64■□□□□ 0.9
VARS2-209ENST00000477288 A1BGP04217 495 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 NONOQ15233 471 aaKnown RBP eCLIP20.64■□□□□ 0.89
VARS2-209ENST00000477288 ANO1Q5XXA6 986 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 DCUN1D2Q6PH85 259 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 G2E3Q7L622 706 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 APPBP2Q92624 585 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 NAPGQ99747 312 aaPredicted RBP20.64■□□□□ 0.89
VARS2-209ENST00000477288 MYL10Q9BUA6 226 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 RABEP2Q9H5N1 569 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 ASIC3Q9UHC3 531 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 FEZ2Q9UHY8 353 aaPredicted RBP20.64■□□□□ 0.89
VARS2-209ENST00000477288 GCNT3O95395 438 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 MAN1A1P33908 653 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 ZNF710Q8N1W2 664 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 GABPB2Q8TAK5 448 aaPredicted RBP20.64■□□□□ 0.89
VARS2-209ENST00000477288 CTTNBP2NLQ9P2B4 639 aa20.64■□□□□ 0.89
VARS2-209ENST00000477288 HERC4Q5GLZ8 1057 aaPredicted RBP20.64■□□□□ 0.89
VARS2-209ENST00000477288 CASQ2O14958 399 aaPredicted RBP20.63■□□□□ 0.89
VARS2-209ENST00000477288 POLR2DO15514 142 aaKnown RBP20.63■□□□□ 0.89
VARS2-209ENST00000477288 NUF2Q9BZD4 464 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
VARS2-209ENST00000477288 PPIP5K2O43314 1243 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 SARNPP82979 210 aaKnown RBP20.63■□□□□ 0.89
VARS2-209ENST00000477288 SF3A3Q12874 501 aaKnown RBP eCLIP20.63■□□□□ 0.891e-6■■□□□ 12.6
VARS2-209ENST00000477288 FAM47CQ5HY64 1035 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 ATL3Q6DD88 541 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 CYP26C1Q6V0L0 522 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 ARHGEF2Q92974 986 aaKnown RBP20.63■□□□□ 0.89
VARS2-209ENST00000477288 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 EXOC3O60645 756 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 CALCRLQ16602 461 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 AFAP1L1Q8TED9 768 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 PAGR1Q9BTK6 254 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 SYNRGQ9UMZ2 1314 aa20.63■□□□□ 0.89
VARS2-209ENST00000477288 PCK1P35558 622 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 NELFCDQ8IXH7 590 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 CLGNO14967 610 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 U2AF2P26368 475 aaKnown RBP eCLIP20.62■□□□□ 0.895e-7■□□□□ 11
VARS2-209ENST00000477288 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 CACNA2D3Q8IZS8 1091 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 MRPL44Q9H9J2 332 aaKnown RBP20.62■□□□□ 0.89
VARS2-209ENST00000477288 KRT25Q7Z3Z0 450 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 VCX3BQ9H321 246 aa20.62■□□□□ 0.89
VARS2-209ENST00000477288 ZBTB24O43167 697 aaPredicted RBP20.62■□□□□ 0.89
VARS2-209ENST00000477288 RIOK1Q9BRS2 568 aaKnown RBP20.62■□□□□ 0.89
VARS2-209ENST00000477288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms