RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 GPAT2Q6NUI2 795 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 SWAP70Q9UH65 585 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 ZBTB21Q9ULJ3 1066 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 SLC45A1Q9Y2W3 748 aa16.12■□□□□ 0.17
ACTN4-205ENST00000477174 GSG1L2A8MUP6 293 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 C19orf81C9J6K1 198 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
ACTN4-205ENST00000477174 GPAA1O43292 621 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 GDF11O95390 407 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 SHMT1P34896 483 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 SP3Q02447 781 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 PKN2Q16513 984 aaKnown RBP16.11■□□□□ 0.17
ACTN4-205ENST00000477174 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 CTU1Q7Z7A3 348 aaKnown RBP16.11■□□□□ 0.17
ACTN4-205ENST00000477174 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-205ENST00000477174 CABP5Q9NP86 173 aa16.11■□□□□ 0.17
ACTN4-205ENST00000477174 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.11■□□□□ 0.17
ACTN4-205ENST00000477174 GH2P01242 217 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 CYP2D6P10635 497 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 BACE1P56817 501 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 DGKZQ13574 1117 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 ABCB5Q2M3G0 1257 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 SBK1Q52WX2 424 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
ACTN4-205ENST00000477174 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
ACTN4-205ENST00000477174 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 LAMB1P07942 1786 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 M0R2C6 588 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 APPP05067 770 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 ARHGEF6Q15052 776 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 ERO1AQ96HE7 468 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 PARK7Q99497 189 aaKnown RBP16.09■□□□□ 0.17
ACTN4-205ENST00000477174 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 MCOLN1Q9GZU1 580 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 ARPP21Q9UBL0 812 aaPredicted RBP16.09■□□□□ 0.17
ACTN4-205ENST00000477174 AGTPBP1Q9UPW5 1226 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
ACTN4-205ENST00000477174 EVX2Q03828 476 aa16.08■□□□□ 0.16
ACTN4-205ENST00000477174 SHROOM1Q2M3G4 852 aaPredicted RBP16.08■□□□□ 0.16
ACTN4-205ENST00000477174 C17orf99Q6UX52 265 aa16.08■□□□□ 0.16
ACTN4-205ENST00000477174 DYNLL2Q96FJ2 89 aa16.08■□□□□ 0.16
ACTN4-205ENST00000477174 CCDC17Q96LX7 622 aa16.08■□□□□ 0.16
ACTN4-205ENST00000477174 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
ACTN4-205ENST00000477174 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
ACTN4-205ENST00000477174 CYP2D7A0A087X1C5 515 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 CDK8P49336 464 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 HMGCS2P54868 508 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.16
ACTN4-205ENST00000477174 MTMR2Q13614 643 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 RAB3GAP1Q15042 981 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 C16orf86Q6ZW13 317 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 IFNL3Q8IZI9 196 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 TMOD4Q9NZQ9 345 aa16.07■□□□□ 0.16
ACTN4-205ENST00000477174 MYH1P12882 1939 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 CYP2C8P10632 490 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 TDO2P48775 406 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 ABHD8Q96I13 439 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 PNMA3Q9UL41 463 aa16.06■□□□□ 0.16
ACTN4-205ENST00000477174 SIPA1L1O43166 1804 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 MINDY4BA8MYZ0 360 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
ACTN4-205ENST00000477174 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-205ENST00000477174 GUCY1A2P33402 732 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 USP14P54578 494 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 KIF22Q14807 665 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 SEPT2Q15019 361 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 TREML2Q5T2D2 321 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 KIAA1683Q9H0B3 1180 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 ZNF287Q9HBT7 754 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 EPB41L4AQ9HCS5 686 aaPredicted RBP16.05■□□□□ 0.16
ACTN4-205ENST00000477174 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
ACTN4-205ENST00000477174 ADGRA2Q96PE1 1338 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 SMIM22K7EJ46 135 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 HIP1O00291 1037 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 GNRH1P01148 92 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 SDSP20132 328 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 OSBPP22059 807 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 PDE4AP27815 886 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 OTOP1Q7RTM1 612 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 CD99L2Q8TCZ2 262 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 SMCR8Q8TEV9 937 aaPredicted RBP16.04■□□□□ 0.16
ACTN4-205ENST00000477174 FAM227BQ96M60 508 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 NAPBQ9H115 298 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 EFCC1Q9HA90 598 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 CPA4Q9UI42 421 aa16.04■□□□□ 0.16
ACTN4-205ENST00000477174 BCRP11274 1271 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
ACTN4-205ENST00000477174 ALX1Q15699 326 aa16.03■□□□□ 0.16
ACTN4-205ENST00000477174 FBXO46Q6PJ61 603 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms