RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 TMOD4Q9NZQ9 345 aa9.21□□□□□ -0.94
PRPF3-205ENST00000476970 PLXNA1Q9UIW2 1896 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 DDTLA6NHG4 134 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 USP17L5A8MUK1 530 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 CNGA1P29973 690 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 HERVK_113P62684 666 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 ERVK-24P63145 666 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 MAP2K5Q13163 448 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 SNX17Q15036 470 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 CCL14Q16627 93 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 MORN1Q5T089 497 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 ZGPATQ8N5A5 531 aaKnown RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 VGLL2Q8N8G2 317 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 TIFAQ96CG3 184 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 GNL3LQ9NVN8 582 aaKnown RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.2□□□□□ -0.94
PRPF3-205ENST00000476970 SALL1Q9NSC2 1324 aa9.2□□□□□ -0.94
PRPF3-205ENST00000476970 ALDH1L1O75891 902 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 GABBR2O75899 941 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 HOXA7P31268 230 aaPredicted RBP9.19□□□□□ -0.94
PRPF3-205ENST00000476970 CCNA1P78396 465 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 PICALMQ13492 652 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 AAK1Q2M2I8 961 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 TRIM60Q495X7 471 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 LRRC24Q50LG9 513 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 SLC39A5Q6ZMH5 540 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 SH3BP5LQ7L8J4 393 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 GAKO14976 1311 aa9.19□□□□□ -0.94
PRPF3-205ENST00000476970 F6X3S4 739 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 SEMA3EO15041 775 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 FGFR2P21802 821 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 ATP2B2Q01814 1243 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 FPGSQ05932 587 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 MTMR2Q13614 643 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 GJC2Q5T442 439 aaPredicted RBP9.18□□□□□ -0.94
PRPF3-205ENST00000476970 CCDC174Q6PII3 467 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 DZIP1Q86YF9 867 aaKnown RBP9.18□□□□□ -0.94
PRPF3-205ENST00000476970 LPIN2Q92539 896 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 EDC3Q96F86 508 aaKnown RBP9.18□□□□□ -0.94
PRPF3-205ENST00000476970 P2RX7Q99572 595 aaKnown RBP9.18□□□□□ -0.94
PRPF3-205ENST00000476970 PAGR1Q9BTK6 254 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 TXNRD2Q9NNW7 524 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 ZNF236Q9UL36 1845 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 DENND2AQ9ULE3 1009 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 TACC3Q9Y6A5 838 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
PRPF3-205ENST00000476970 TRIM43BA6NCK2 446 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 SLC15A5A6NIM6 579 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 C19orf81C9J6K1 198 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 CLTBP09497 229 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 RAG1P15918 1043 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 CAP2P40123 477 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 BACE1P56817 501 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 TMEM31Q5JXX7 168 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 TRIM43Q96BQ3 446 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-205ENST00000476970 SUCLG2Q96I99 432 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 SNX27Q96L92 541 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 LRFN3Q9BTN0 628 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 WDR18Q9BV38 432 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 PORCNQ9H237 461 aa9.17□□□□□ -0.94
PRPF3-205ENST00000476970 DDX4Q9NQI0 724 aaKnown RBP9.17□□□□□ -0.94
PRPF3-205ENST00000476970 CXXC1Q9P0U4 656 aaPredicted RBP9.17□□□□□ -0.94
PRPF3-205ENST00000476970 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
PRPF3-205ENST00000476970 MAP4K4O95819 1239 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-205ENST00000476970 ASNSP08243 561 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 HOXC6P09630 235 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 CYBAP13498 195 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 BTDP43251 543 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 RABL6Q3YEC7 729 aaPredicted RBP9.16□□□□□ -0.94
PRPF3-205ENST00000476970 WDR78Q5VTH9 848 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 CCDC129Q6ZRS4 1044 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 PRDM12Q9H4Q4 367 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 BICC1Q9H694 974 aaKnown RBP9.16□□□□□ -0.94
PRPF3-205ENST00000476970 RBPJLQ9UBG7 517 aa9.16□□□□□ -0.94
PRPF3-205ENST00000476970 GBF1Q92538 1859 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 IL16Q14005 1332 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 FAM196BA6NMK8 535 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 KIAA0355O15063 1070 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 IGFBP4P22692 258 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 TLE2Q04725 743 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 SPTY2D1Q68D10 685 aaPredicted RBP9.15□□□□□ -0.94
PRPF3-205ENST00000476970 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
PRPF3-205ENST00000476970 GINM1Q9NU53 330 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 FLRT1Q9NZU1 646 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 RABGAP1Q9Y3P9 1069 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 CHD9Q3L8U1 2897 aa9.15□□□□□ -0.94
PRPF3-205ENST00000476970 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 SEPT4O43236 478 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 PEX10O60683 326 aa9.14□□□□□ -0.95
PRPF3-205ENST00000476970 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms