RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 FUT8Q9BYC5 575 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 PHAXQ9H814 394 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 FAM169AQ9Y6X4 670 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 GLI3P10071 1580 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 MEX3CQ5U5Q3 659 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 CAPRIN2Q6IMN6 1127 aaKnown RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 ZSCAN25Q6NSZ9 544 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 OLFML1Q6UWY5 402 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 PACS1Q6VY07 963 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 CCDC65Q8IXS2 484 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 NACC2Q96BF6 587 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 PLEKHA4Q9H4M7 779 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 MKS1Q9NXB0 559 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 UBAP1Q9NZ09 502 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 MAGEC2Q9UBF1 373 aaPredicted RBP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 DNAI1Q9UI46 699 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
CNTNAP3B-205ENST00000476961 ANXA1P04083 346 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 VIL1P09327 827 aaKnown RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 INPP5BP32019 993 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PROSER3Q2NL68 480 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MIS18BP1Q6P0N0 1132 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MARCH10Q8NA82 808 aaPredicted RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PIGBQ92521 554 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GORASP1Q9BQQ3 440 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ACBD3Q9H3P7 528 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 INCENPQ9NQS7 918 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ZBTB40Q9NUA8 1239 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TMOD3Q9NYL9 352 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 F6X3S4 739 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SNRPA1P09661 255 aaKnown RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FBXO9Q9UK97 447 aaPredicted RBP9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 C5P01031 1676 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PAPPAQ13219 1627 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 AFF2P51816 1311 aa9.39□□□□□ -0.91
CNTNAP3B-205ENST00000476961 KCPQ6ZWJ8 1503 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MBD4O95243 580 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ABL1P00519 1130 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 LMNB1P20700 586 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PDIA6Q15084 440 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC158Q5M9N0 1113 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FAAH2Q6GMR7 532 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 OTUD6AQ7L8S5 288 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ANKRD13AQ8IZ07 590 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ZFAND2BQ8WV99 257 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SEZ6LQ9BYH1 1024 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLC39A2Q9NP94 309 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ZDHHC9Q9Y397 364 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 USP16Q9Y5T5 823 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ERICH2A1L162 156 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MYO1FO00160 1098 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SRGAP3O43295 1099 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 EZRP15311 586 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 COPB2P35606 906 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HDAC4P56524 1084 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CLPPQ16740 277 aaPredicted RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 VPS53Q5VIR6 699 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MAGEC3Q8TD91 643 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 UBXN4Q92575 508 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CAPN7Q9Y6W3 813 aa9.38□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GOLGA6L10A6NI86 522 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MAP2K7O14733 419 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FSBPO95073 299 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FERP16591 822 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MCM2P49736 904 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CLIC6Q96NY7 704 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CENPOQ9BU64 300 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BCL9O00512 1426 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 UBR2Q8IWV8 1755 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 UNCXA6NJT0 531 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 USP27XA6NNY8 438 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CBFA2T2O43439 604 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLC4A8Q2Y0W8 1093 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CEP85LQ5SZL2 805 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC150Q8NCX0 1101 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ERMNQ8TAM6 284 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 USP33Q8TEY7 942 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PTCD1O75127 700 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HOXD10P28358 340 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms