RNA–Protein interactions for RNA: ENST00000476531.1

PGK1-203, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 2

Gene PGK1, Length 960 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-203ENST00000476531 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
PGK1-203ENST00000476531 MAP4K4O95819 1239 aaPredicted RBP12.83□□□□□ -0.36
PGK1-203ENST00000476531 HMGCRP04035 888 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 CAP2P40123 477 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
PGK1-203ENST00000476531 MNX1P50219 401 aaPredicted RBP12.83□□□□□ -0.36
PGK1-203ENST00000476531 HMGCS2P54868 508 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 TRIM32Q13049 653 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 SH3D19Q5HYK7 790 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 TBC1D9Q6ZT07 1266 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 CHD1LQ86WJ1 897 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 SPATA5Q8NB90 893 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 LRCH3Q96II8 777 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
PGK1-203ENST00000476531 ASCC2Q9H1I8 757 aaPredicted RBP12.83□□□□□ -0.36
PGK1-203ENST00000476531 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 LDHCP07864 332 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 ARID4AP29374 1257 aaPredicted RBP12.82□□□□□ -0.36
PGK1-203ENST00000476531 GSTO1P78417 241 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 NECAB2Q7Z6G3 386 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 ANKLE1Q8NAG6 615 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 GDF15Q99988 308 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 IL1RAPL2Q9NP60 686 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 MORF4L1Q9UBU8 362 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 DOCK3Q8IZD9 2030 aa12.82□□□□□ -0.36
PGK1-203ENST00000476531 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
PGK1-203ENST00000476531 JAG1P78504 1218 aa12.81□□□□□ -0.36
PGK1-203ENST00000476531 PABPC4Q13310 644 aaKnown RBP eCLIP12.81□□□□□ -0.368e-11■■□□□ 14
PGK1-203ENST00000476531 RPTORQ8N122 1335 aa12.81□□□□□ -0.36
PGK1-203ENST00000476531 PLXNB2O15031 1838 aa12.81□□□□□ -0.36
PGK1-203ENST00000476531 BMP8BP34820 402 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 MCAMP43121 646 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 OS9Q13438 667 aaPredicted RBP12.8□□□□□ -0.36
PGK1-203ENST00000476531 TEX11Q8IYF3 940 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 C7orf61Q8IZ16 206 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 SH3RF3Q8TEJ3 882 aaPredicted RBP12.8□□□□□ -0.36
PGK1-203ENST00000476531 TRIB2Q92519 343 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 HERC5Q9UII4 1024 aaKnown RBP12.8□□□□□ -0.36
PGK1-203ENST00000476531 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
PGK1-203ENST00000476531 SIPA1L1O43166 1804 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 ATAD5Q96QE3 1844 aa12.8□□□□□ -0.36
PGK1-203ENST00000476531 PEX10O60683 326 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
PGK1-203ENST00000476531 G3BP1Q13283 466 aaKnown RBP eCLIP12.79□□□□□ -0.362e-15■■■□□ 15.4
PGK1-203ENST00000476531 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 TSHZ3Q63HK5 1081 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 LRRCC1Q9C099 1032 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 DNAJC18Q9H819 358 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 AS3MTQ9HBK9 375 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 HMX1Q9NP08 348 aaPredicted RBP12.79□□□□□ -0.36
PGK1-203ENST00000476531 OGDHLQ9ULD0 1010 aa12.79□□□□□ -0.36
PGK1-203ENST00000476531 RAB11FIP3O75154 756 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
PGK1-203ENST00000476531 BACE1P56817 501 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 MTMR2Q13614 643 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 SHROOM1Q2M3G4 852 aaPredicted RBP12.78□□□□□ -0.36
PGK1-203ENST00000476531 GORABQ5T7V8 394 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 METTL16Q86W50 562 aaKnown RBP12.78□□□□□ -0.36
PGK1-203ENST00000476531 P2RX7Q99572 595 aaKnown RBP12.78□□□□□ -0.36
PGK1-203ENST00000476531 C11orf49Q9H6J7 331 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 PI4KBQ9UBF8 816 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
PGK1-203ENST00000476531 DDX60LQ5H9U9 1706 aaKnown RBP12.77□□□□□ -0.36
PGK1-203ENST00000476531 UQCRFS1P1P0C7P4 283 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 SYN1P17600 705 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 CYP2B6P20813 491 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 PPP4CP60510 307 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 HERVK_113P62684 666 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
PGK1-203ENST00000476531 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 PLEKHM2Q8IWE5 1019 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 USP6NLQ92738 828 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 KIF1BPQ96EK5 621 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 DHX36Q9H2U1 1008 aaKnown RBP12.77□□□□□ -0.37
PGK1-203ENST00000476531 AATFQ9NY61 560 aaKnown RBP eCLIP12.77□□□□□ -0.372e-18■■■■□ 24.9
PGK1-203ENST00000476531 TLR7Q9NYK1 1049 aaKnown RBP12.77□□□□□ -0.37
PGK1-203ENST00000476531 TMOD4Q9NZQ9 345 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 LRP2BPQ9P2M1 347 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 PFASO15067 1338 aa12.77□□□□□ -0.37
PGK1-203ENST00000476531 ASNSP08243 561 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 XRCC5P13010 732 aaKnown RBP12.76□□□□□ -0.37
PGK1-203ENST00000476531 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
PGK1-203ENST00000476531 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
PGK1-203ENST00000476531 NAA16Q6N069 864 aaPredicted RBP12.76□□□□□ -0.37
PGK1-203ENST00000476531 GPR153Q6NV75 609 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 TGFBRAP1Q8WUH2 860 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 EAF2Q96CJ1 260 aaPredicted RBP12.76□□□□□ -0.37
PGK1-203ENST00000476531 NUDT12Q9BQG2 462 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 SNRKQ9NRH2 765 aa12.76□□□□□ -0.37
PGK1-203ENST00000476531 FLT1P17948 1338 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms