RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 LRRFIP1Q32MZ4 808 aaKnown RBP9.58□□□□□ -0.88
VAPB-205ENST00000476395 APOA5Q6Q788 366 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 LRRC31Q6UY01 552 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 LEKR1Q6ZMV7 388 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 WWC3Q9ULE0 1092 aa9.58□□□□□ -0.88
VAPB-205ENST00000476395 PCDH11XQ9BZA7 1347 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 PCDH11YQ9BZA8 1340 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 MYH13Q9UKX3 1938 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 GSDMDP57764 484 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 FMR1Q06787 632 aaKnown RBP eCLIP9.57□□□□□ -0.88
VAPB-205ENST00000476395 TOGARAM2Q6ZUX3 1019 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 BRINP3Q76B58 766 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 ZNF512BQ96KM6 892 aaPredicted RBP9.57□□□□□ -0.88
VAPB-205ENST00000476395 GREM2Q9H772 168 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.57□□□□□ -0.88
VAPB-205ENST00000476395 PPP6R2O75170 966 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 ZNF18P17022 549 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 KRT40Q6A162 431 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 TTLL11Q8NHH1 800 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 TAF1P21675 1872 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
VAPB-205ENST00000476395 SLC3A2P08195 630 aaKnown RBP9.57□□□□□ -0.88
VAPB-205ENST00000476395 SARSP49591 514 aaKnown RBP9.57□□□□□ -0.88
VAPB-205ENST00000476395 NCOA7Q8NI08 942 aa9.57□□□□□ -0.88
VAPB-205ENST00000476395 PHLPP2Q6ZVD8 1323 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 WNT7AO00755 349 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 FGFR2P21802 821 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 IBSPP21815 317 aaPredicted RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 MTF1Q14872 753 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 STK38Q15208 465 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 IMMTQ16891 758 aaKnown RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 NT5DC1Q5TFE4 455 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 FBXW10Q5XX13 1052 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 RSRC2Q7L4I2 434 aaKnown RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 VSTM4Q8IW00 320 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 GOLGA6L1Q8N7Z2 621 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 SDF4Q9BRK5 362 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
VAPB-205ENST00000476395 EHD4Q9H223 541 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 SGMS1Q86VZ5 419 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 MICALL1Q8N3F8 863 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 ZBTB38Q8NAP3 1195 aaPredicted RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 ZCRB1Q8TBF4 217 aaKnown RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 RIN2Q8WYP3 895 aaPredicted RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 KIFC2Q96AC6 838 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 GDAP1L1Q96MZ0 367 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 SRRTQ9BXP5 876 aaKnown RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 CXorf56Q9H5V9 222 aa9.56□□□□□ -0.88
VAPB-205ENST00000476395 ANGEL1Q9UNK9 670 aaKnown RBP9.56□□□□□ -0.88
VAPB-205ENST00000476395 A0A087X0B3 334 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 IRF6O14896 467 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 RHOXF2BP0C7M4 288 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 LIG3P49916 1009 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 STRBPQ96SI9 672 aaKnown RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 RHOXF2Q9BQY4 288 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 FANCLQ9NW38 375 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 MRFAP1Q9Y605 127 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 SCN7AQ01118 1682 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 B4E1Z4 1266 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 SNAP23O00161 211 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 ZFYP08048 801 aaPredicted RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 PHKA1P46020 1223 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 DHX8Q14562 1220 aaKnown RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 TTC39AQ5SRH9 613 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 IQUBQ8NA54 791 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CNNM3Q8NE01 707 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 SPATA20Q8TB22 786 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 TEX13AQ9BXU3 409 aaPredicted RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 ANKZF1Q9H8Y5 726 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 ABCB6Q9NP58 842 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CEP126Q9P2H0 1117 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 FBXO2Q9UK22 296 aaPredicted RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 ASAP1Q9ULH1 1129 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CDHR2Q9BYE9 1310 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 MAP2K7O14733 419 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CORO7P57737 925 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 MAP3K9P80192 1104 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 SPECC1Q5M775 1068 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 GPR161Q8N6U8 529 aaKnown RBP9.55□□□□□ -0.88
VAPB-205ENST00000476395 TC2NQ8N9U0 490 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 CCDC102AQ96A19 550 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 ALG1Q9BT22 464 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 PPP2R2CQ9Y2T4 447 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
VAPB-205ENST00000476395 ZNF532Q9HCE3 1301 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 ADKP55263 362 aaKnown RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 EARS2Q5JPH6 523 aaKnown RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 CTR9Q6PD62 1173 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 NLRP10Q86W26 655 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 DEF6Q9H4E7 631 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 ZSWIM5Q9P217 1185 aa9.54□□□□□ -0.88
VAPB-205ENST00000476395 BAZ2AQ9UIF9 1905 aaKnown RBP9.54□□□□□ -0.88
VAPB-205ENST00000476395 COL1A1P02452 1464 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms