RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 LRRC8AQ8IWT6 810 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 MYRIPQ8NFW9 859 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
UBXN11-214ENST00000475591 DCP1AQ9NPI6 582 aaPredicted RBP16.23■□□□□ 0.19
UBXN11-214ENST00000475591 KCNH3Q9ULD8 1083 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 COL24A1Q17RW2 1714 aa16.23■□□□□ 0.19
UBXN11-214ENST00000475591 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 FUT2Q10981 343 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 TIGD1Q96MW7 591 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 FOXP1Q9H334 677 aaPredicted RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 MYH13Q9UKX3 1938 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 FAM237AA0A1B0GTK4 181 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 C16orf45Q96MC5 204 aaPredicted RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 IFNKQ9P0W0 207 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
UBXN11-214ENST00000475591 FBXO2Q9UK22 296 aaPredicted RBP16.22■□□□□ 0.19
UBXN11-214ENST00000475591 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 CNNM3Q8NE01 707 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 XPO4Q9C0E2 1151 aaKnown RBP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 ANKRD2Q9GZV1 360 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 V9GY48 417 aaPredicted RBP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 WNT7AO00755 349 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 SEMA3EO15041 775 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 SMC2O95347 1197 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 LMOD1P29536 600 aaPredicted RBP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 RCAN1P53805 252 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 TROAPQ12815 778 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 KRBA2Q6ZNG9 492 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 USP49Q70CQ1 688 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 CATIPQ7Z7H3 387 aa16.21■□□□□ 0.19
UBXN11-214ENST00000475591 RNF26Q9BY78 433 aaPredicted RBP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBXN11-214ENST00000475591 IRS2Q9Y4H2 1338 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 DYNC1I1O14576 645 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 FGRP09769 529 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 ATP1A3P13637 1013 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 NFIXQ14938 502 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 IQCA1Q86XH1 822 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 PRIMPOLQ96LW4 560 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 HSD3B7Q9H2F3 369 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 USP27XA6NNY8 438 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 AKAP17AQ02040 695 aaKnown RBP16.2■□□□□ 0.18
UBXN11-214ENST00000475591 GRIK5Q16478 980 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 RILPL1Q5EBL4 403 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 GRAMD1CQ8IYS0 662 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 CRNKL1Q9BZJ0 848 aaKnown RBP16.2■□□□□ 0.18
UBXN11-214ENST00000475591 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 PCDHA5Q9Y5H7 936 aa16.2■□□□□ 0.18
UBXN11-214ENST00000475591 USP17L8P0C7I0 530 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 PTPREP23469 700 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 RFC4P35249 363 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 PDILTQ8N807 584 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 RGL2O15211 777 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
UBXN11-214ENST00000475591 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 VEGFAP15692 232 aaPredicted RBP16.19■□□□□ 0.18
UBXN11-214ENST00000475591 BMP6P22004 513 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
UBXN11-214ENST00000475591 MYH6P13533 1939 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 RRP9O43818 475 aaKnown RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 CCZ1BP86790 482 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 PDE4BQ07343 736 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 DZIP1Q86YF9 867 aaKnown RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 SERTAD1Q9UHV2 236 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 RIOK3O14730 519 aaKnown RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 SKILP12757 684 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 MDM2Q00987 491 aaPredicted RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 PTPN21Q16825 1174 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 TMC6Q7Z403 805 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
UBXN11-214ENST00000475591 PHF20Q9BVI0 1012 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 CSRNP2Q9H175 543 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
UBXN11-214ENST00000475591 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 PRPF3O43395 683 aaKnown RBP16.17■□□□□ 0.18
UBXN11-214ENST00000475591 TMTC3Q6ZXV5 915 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 PDS5AQ29RF7 1337 aaKnown RBP16.17■□□□□ 0.18
UBXN11-214ENST00000475591 THSD7AQ9UPZ6 1657 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 NPY5RQ15761 445 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 ZNF827Q17R98 1081 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 HSP90AA4PQ58FG1 418 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 TRAPPC3LQ5T215 181 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 DPF2Q92785 391 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 DYNLL2Q96FJ2 89 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 CNTNAP5Q8WYK1 1306 aa16.17■□□□□ 0.18
UBXN11-214ENST00000475591 SMTNL1A8MU46 457 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 ORC4O43929 436 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 KRT2P35908 639 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 FANCCQ00597 558 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 TPD52L1Q16890 204 aaPredicted RBP16.16■□□□□ 0.18
UBXN11-214ENST00000475591 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 TSPY2A6NKD2 308 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms