RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 BACE1P56817 501 aa24.72■■□□□ 1.55
PDLIM4-206ENST00000474421 ANKRD13CQ8N6S4 541 aa24.72■■□□□ 1.55
PDLIM4-206ENST00000474421 SLAIN1Q8ND83 568 aa24.72■■□□□ 1.55
PDLIM4-206ENST00000474421 UBXN2AP68543 259 aa24.71■■□□□ 1.55
PDLIM4-206ENST00000474421 TTC6Q86TZ1 520 aa24.71■■□□□ 1.55
PDLIM4-206ENST00000474421 EHD4Q9H223 541 aa24.71■■□□□ 1.55
PDLIM4-206ENST00000474421 BIN2Q9UBW5 565 aaPredicted RBP24.71■■□□□ 1.55
PDLIM4-206ENST00000474421 ZBTB21Q9ULJ3 1066 aa24.71■■□□□ 1.55
PDLIM4-206ENST00000474421 MAGEB6P1A0A0J9YX57 407 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 MTMR2Q13614 643 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 SLC9C2Q5TAH2 1124 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 NKX2-3Q8TAU0 364 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 COA7Q96BR5 231 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 ASCC2Q9H1I8 757 aaPredicted RBP24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 SERPINB13Q9UIV8 391 aa24.7■■□□□ 1.54
PDLIM4-206ENST00000474421 USP17L10C9JJH3 530 aa24.69■■□□□ 1.54
PDLIM4-206ENST00000474421 GDF11O95390 407 aa24.69■■□□□ 1.54
PDLIM4-206ENST00000474421 PDE6AP16499 860 aa24.69■■□□□ 1.54
PDLIM4-206ENST00000474421 DNAJC2Q99543 621 aaKnown RBP24.69■■□□□ 1.54
PDLIM4-206ENST00000474421 RIOK1Q9BRS2 568 aaKnown RBP24.69■■□□□ 1.54
PDLIM4-206ENST00000474421 GOLIM4O00461 696 aa24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 FLT3LGP49771 235 aa24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 IRX3P78415 501 aaPredicted RBP24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 IRF5Q13568 498 aa24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 CRNKL1Q9BZJ0 848 aaKnown RBP24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 GABRQQ9UN88 632 aa24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 DOCK3Q8IZD9 2030 aa24.68■■□□□ 1.54
PDLIM4-206ENST00000474421 ADCY3O60266 1144 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 SLC34A2O95436 690 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 HOXA7P31268 230 aaPredicted RBP24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 JAG1P78504 1218 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 MTFR1Q15390 333 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 TATDN1Q6P1N9 297 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 PXYLP1Q8TE99 480 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 BCL11AQ9H165 835 aa24.67■■□□□ 1.54
PDLIM4-206ENST00000474421 ZNF532Q9HCE3 1301 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 GH2P01242 217 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 POLR3DP05423 398 aaPredicted RBP24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 GJB1P08034 283 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 CCL5P13501 91 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 ATP5JP18859 108 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 GCC1Q96CN9 775 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 RNF208Q9H0X6 261 aa24.65■■□□□ 1.54
PDLIM4-206ENST00000474421 NAV1Q8NEY1 1877 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 CERKLQ49MI3 558 aaPredicted RBP24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 C20orf194Q5TEA3 1177 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 USP17L2Q6R6M4 530 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 GTF3C2Q8WUA4 911 aaPredicted RBP24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 LRRCC1Q9C099 1032 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 PAG1Q9NWQ8 432 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 MORF4L1Q9UBU8 362 aa24.64■■□□□ 1.54
PDLIM4-206ENST00000474421 GJA8P48165 433 aa24.63■■□□□ 1.53
PDLIM4-206ENST00000474421 SHROOM1Q2M3G4 852 aaPredicted RBP24.63■■□□□ 1.53
PDLIM4-206ENST00000474421 BOLA2Q9H3K6 86 aa24.63■■□□□ 1.53
PDLIM4-206ENST00000474421 CABP5Q9NP86 173 aa24.63■■□□□ 1.53
PDLIM4-206ENST00000474421 DDX60LQ5H9U9 1706 aaKnown RBP24.63■■□□□ 1.53
PDLIM4-206ENST00000474421 TCRBV5S4A2TA0A5A2 114 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 CAPN2P17655 700 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 ABCB5Q2M3G0 1257 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 FEZ1Q99689 392 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 HAUS7Q99871 368 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 TAOK2Q9UL54 1235 aa24.62■■□□□ 1.53
PDLIM4-206ENST00000474421 PLCD1P51178 756 aa24.61■■□□□ 1.53
PDLIM4-206ENST00000474421 USP14P54578 494 aa24.61■■□□□ 1.53
PDLIM4-206ENST00000474421 HERVK_113P62684 666 aa24.61■■□□□ 1.53
PDLIM4-206ENST00000474421 P2RX7Q99572 595 aaKnown RBP24.61■■□□□ 1.53
PDLIM4-206ENST00000474421 MCM9Q9NXL9 1143 aa24.61■■□□□ 1.53
PDLIM4-206ENST00000474421 INHAP05111 366 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 ELNP15502 786 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 RAB3GAP1Q15042 981 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 GPRC5AQ8NFJ5 357 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 C12orf42Q96LP6 360 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 EMILIN3Q9NT22 766 aa24.6■■□□□ 1.53
PDLIM4-206ENST00000474421 MYH7P12883 1935 aa24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 SHMT1P34896 483 aa24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 ADD2P35612 726 aa24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 SHISA4Q96DD7 197 aa24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 EDC3Q96F86 508 aaKnown RBP24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 UNC93B1Q9H1C4 597 aa24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 DCP1AQ9NPI6 582 aaPredicted RBP24.59■■□□□ 1.53
PDLIM4-206ENST00000474421 GABPAQ06546 454 aa24.58■■□□□ 1.53
PDLIM4-206ENST00000474421 ZSCAN25Q6NSZ9 544 aa24.58■■□□□ 1.53
PDLIM4-206ENST00000474421 LCORLQ8N3X6 602 aa24.58■■□□□ 1.53
PDLIM4-206ENST00000474421 KIAA1683Q9H0B3 1180 aa24.58■■□□□ 1.53
PDLIM4-206ENST00000474421 ATP8A2Q9NTI2 1148 aa24.58■■□□□ 1.53
PDLIM4-206ENST00000474421 USP17L15C9J2P7 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L13C9JLJ4 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L11C9JVI0 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L18D6R9N7 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L22D6RA61 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L17D6RBQ6 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L19D6RCP7 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L20D6RJB6 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 USP17L24Q0WX57 530 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 U2AF1L4Q8WU68 220 aaKnown RBP24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 SDR42E1Q8WUS8 393 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 SWAP70Q9UH65 585 aa24.57■■□□□ 1.52
PDLIM4-206ENST00000474421 SGPL1O95470 568 aa24.56■■□□□ 1.52
PDLIM4-206ENST00000474421 MAPK4P31152 587 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms