RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 ANAPC4Q9UJX5 808 aa16.12■□□□□ 0.17
LDLRAP1-204ENST00000474283 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
LDLRAP1-204ENST00000474283 ROBO3Q96MS0 1386 aa16.12■□□□□ 0.17
LDLRAP1-204ENST00000474283 TRAF5O00463 557 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 NF2P35240 595 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 PDE4BQ07343 736 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 PRKG1Q13976 671 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 FOXP4Q8IVH2 680 aaPredicted RBP16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 TMX3Q96JJ7 454 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 MTA3Q9BTC8 594 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 EHD4Q9H223 541 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 ZNF408Q9H9D4 720 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 MKNK2Q9HBH9 465 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 INCENPQ9NQS7 918 aa16.11■□□□□ 0.17
LDLRAP1-204ENST00000474283 PAPPA2Q9BXP8 1791 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 SSC5DA1L4H1 1573 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 E7EWF7 191 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 PRDM1O75626 825 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 CDK8P49336 464 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 AK2P54819 239 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 DCAF15Q66K64 600 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 TTC14Q96N46 770 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 SWAP70Q9UH65 585 aa16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
LDLRAP1-204ENST00000474283 PDCP20941 246 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 GABPAQ06546 454 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 FMR1Q06787 632 aaKnown RBP eCLIP16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 CUL4AQ13619 759 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 STAG1Q8WVM7 1258 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 FZD1Q9UP38 647 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 NEDD4P46934 1319 aa16.09■□□□□ 0.17
LDLRAP1-204ENST00000474283 ERICH2A1L162 156 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 SHMT1P34896 483 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 STOX1Q6ZVD7 989 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZNF444Q8N0Y2 327 aaPredicted RBP16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZNF341Q9BYN7 854 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 DNAJC18Q9H819 358 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.16
LDLRAP1-204ENST00000474283 B4E1Z4 1266 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 PPP1R12BO60237 982 aaPredicted RBP16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 TBC1D12O60347 775 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 TOMM70O94826 608 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 HSPA6P17066 643 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 ADCK5Q3MIX3 580 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 CERKLQ49MI3 558 aaPredicted RBP16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 METTL16Q86W50 562 aaKnown RBP16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 TMEM87BQ96K49 555 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 TAOK2Q9UL54 1235 aa16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
LDLRAP1-204ENST00000474283 MPHOSPH10O00566 681 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 GDF11O95390 407 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 ITGBL1O95965 494 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 RASA1P20936 1047 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 TMTC2Q8N394 836 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 WRNIP1Q96S55 665 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 ANGEL1Q9UNK9 670 aaKnown RBP16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 SMC3Q9UQE7 1217 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 PTPRFP10586 1907 aa16.06■□□□□ 0.16
LDLRAP1-204ENST00000474283 TSPY2A6NKD2 308 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 ORC4O43929 436 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 KDM4AO75164 1064 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 CELF2O95319 508 aaKnown RBP16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 CD2BP2O95400 341 aaKnown RBP16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 TSPY3P0CV98 308 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 TSPY8P0CW00 308 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 CCDC178Q5BJE1 867 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 TATDN1Q6P1N9 297 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 CPLX2Q6PUV4 134 aaKnown RBP16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 SPRYD3Q8NCJ5 442 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 ESR2Q92731 530 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 ATP6V1DQ9Y5K8 247 aa16.05■□□□□ 0.16
LDLRAP1-204ENST00000474283 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 FGRP09769 529 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 AKR1B1P15121 316 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 IREB2P48200 963 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 TFAP4Q01664 338 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 ABCB5Q2M3G0 1257 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 Q6ZUG5 572 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
LDLRAP1-204ENST00000474283 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms