RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 COA7Q96BR5 231 aa19.78■□□□□ 0.76
CPA4-205ENST00000474254 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
CPA4-205ENST00000474254 HERC5Q9UII4 1024 aaKnown RBP19.78■□□□□ 0.76
CPA4-205ENST00000474254 BAZ2AQ9UIF9 1905 aaKnown RBP19.77■□□□□ 0.76
CPA4-205ENST00000474254 DYNLL1P63167 89 aaKnown RBP19.77■□□□□ 0.76
CPA4-205ENST00000474254 PABPC4Q13310 644 aaKnown RBP eCLIP19.77■□□□□ 0.76
CPA4-205ENST00000474254 ANKRD13CQ8N6S4 541 aa19.77■□□□□ 0.76
CPA4-205ENST00000474254 MIGA1Q8NAN2 632 aa19.77■□□□□ 0.76
CPA4-205ENST00000474254 U2AF1L4Q8WU68 220 aaKnown RBP19.77■□□□□ 0.76
CPA4-205ENST00000474254 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.76
CPA4-205ENST00000474254 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
CPA4-205ENST00000474254 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CPA4-205ENST00000474254 FARP2O94887 1054 aaPredicted RBP19.76■□□□□ 0.75
CPA4-205ENST00000474254 INHAP05111 366 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 ELNP15502 786 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 SPP2Q13103 211 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 TREML2Q5T2D2 321 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 CHRDL2Q6WN34 429 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 ZNF280CQ8ND82 737 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 PXYLP1Q8TE99 480 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 DNAJC2Q99543 621 aaKnown RBP19.76■□□□□ 0.75
CPA4-205ENST00000474254 BCL11AQ9H165 835 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 AS3MTQ9HBK9 375 aa19.76■□□□□ 0.75
CPA4-205ENST00000474254 GOLIM4O00461 696 aa19.75■□□□□ 0.75
CPA4-205ENST00000474254 PDE6AP16499 860 aa19.75■□□□□ 0.75
CPA4-205ENST00000474254 ATP5JP18859 108 aa19.75■□□□□ 0.75
CPA4-205ENST00000474254 IRF5Q13568 498 aa19.75■□□□□ 0.75
CPA4-205ENST00000474254 FAM110CQ1W6H9 321 aa19.75■□□□□ 0.75
CPA4-205ENST00000474254 METTL16Q86W50 562 aaKnown RBP19.75■□□□□ 0.75
CPA4-205ENST00000474254 USP17L5A8MUK1 530 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 SGPL1O95470 568 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 CAP2P40123 477 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 GCLCP48506 637 aaPredicted RBP19.74■□□□□ 0.75
CPA4-205ENST00000474254 HMGCS2P54868 508 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 RIOK1Q9BRS2 568 aaKnown RBP19.74■□□□□ 0.75
CPA4-205ENST00000474254 TRIM34Q9BYJ4 488 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 DNAJC18Q9H819 358 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 NR2E3Q9Y5X4 410 aa19.74■□□□□ 0.75
CPA4-205ENST00000474254 SMARCA5O60264 1052 aaPredicted RBP19.73■□□□□ 0.75
CPA4-205ENST00000474254 TFRCP02786 760 aaKnown RBP19.73■□□□□ 0.75
CPA4-205ENST00000474254 CAPN2P17655 700 aa19.73■□□□□ 0.75
CPA4-205ENST00000474254 RRP1BQ14684 758 aaKnown RBP19.73■□□□□ 0.75
CPA4-205ENST00000474254 SLC9C2Q5TAH2 1124 aa19.73■□□□□ 0.75
CPA4-205ENST00000474254 EDC3Q96F86 508 aaKnown RBP19.73■□□□□ 0.75
CPA4-205ENST00000474254 PAG1Q9NWQ8 432 aa19.73■□□□□ 0.75
CPA4-205ENST00000474254 PALD1Q9ULE6 856 aa19.73■□□□□ 0.75
CPA4-205ENST00000474254 DOCK3Q8IZD9 2030 aa19.73■□□□□ 0.75
CPA4-205ENST00000474254 TCRBV5S4A2TA0A5A2 114 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 HLA-DOAP06340 250 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 USP5P45974 858 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 UBE2Q1Q7Z7E8 422 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 DEFB118Q96PH6 123 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 HAUS7Q99871 368 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 BOLA2Q9H3K6 86 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
CPA4-205ENST00000474254 PCDHB15Q9Y5E8 787 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 ZNF532Q9HCE3 1301 aa19.72■□□□□ 0.75
CPA4-205ENST00000474254 FOXP4Q8IVH2 680 aaPredicted RBP19.71■□□□□ 0.75
CPA4-205ENST00000474254 CRACR2BQ8N4Y2 399 aaPredicted RBP19.71■□□□□ 0.75
CPA4-205ENST00000474254 TMOD4Q9NZQ9 345 aa19.71■□□□□ 0.75
CPA4-205ENST00000474254 TRIOBPQ9H2D6 2365 aa19.7■□□□□ 0.74
CPA4-205ENST00000474254 MAGEB6P1A0A0J9YX57 407 aa19.7■□□□□ 0.74
CPA4-205ENST00000474254 ASNSP08243 561 aa19.7■□□□□ 0.74
CPA4-205ENST00000474254 IRX3P78415 501 aaPredicted RBP19.7■□□□□ 0.74
CPA4-205ENST00000474254 ASCC2Q9H1I8 757 aaPredicted RBP19.7■□□□□ 0.74
CPA4-205ENST00000474254 MTMR2Q13614 643 aa19.69■□□□□ 0.74
CPA4-205ENST00000474254 SH3D19Q5HYK7 790 aa19.69■□□□□ 0.74
CPA4-205ENST00000474254 EHD4Q9H223 541 aa19.69■□□□□ 0.74
CPA4-205ENST00000474254 ECHDC1Q9NTX5 307 aa19.69■□□□□ 0.74
CPA4-205ENST00000474254 EVI5O60447 810 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 HMGCRP04035 888 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 ADD2P35612 726 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 WDR18Q9BV38 432 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 CRNKL1Q9BZJ0 848 aaKnown RBP19.68■□□□□ 0.74
CPA4-205ENST00000474254 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.68■□□□□ 0.74
CPA4-205ENST00000474254 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.74
CPA4-205ENST00000474254 PAK6Q9NQU5 681 aaPredicted RBP19.68■□□□□ 0.74
CPA4-205ENST00000474254 GINM1Q9NU53 330 aa19.68■□□□□ 0.74
CPA4-205ENST00000474254 RBM27Q9P2N5 1060 aaKnown RBP19.68■□□□□ 0.74
CPA4-205ENST00000474254 BACE1P56817 501 aa19.67■□□□□ 0.74
CPA4-205ENST00000474254 JAG1P78504 1218 aa19.67■□□□□ 0.74
CPA4-205ENST00000474254 GPATCH3Q96I76 525 aa19.67■□□□□ 0.74
CPA4-205ENST00000474254 SERPINB13Q9UIV8 391 aa19.67■□□□□ 0.74
CPA4-205ENST00000474254 GDF11O95390 407 aa19.66■□□□□ 0.74
CPA4-205ENST00000474254 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
CPA4-205ENST00000474254 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
CPA4-205ENST00000474254 LCORLQ8N3X6 602 aa19.66■□□□□ 0.74
CPA4-205ENST00000474254 ZBTB21Q9ULJ3 1066 aa19.66■□□□□ 0.74
CPA4-205ENST00000474254 C19orf81C9J6K1 198 aa19.65■□□□□ 0.74
CPA4-205ENST00000474254 TATDN1Q6P1N9 297 aa19.65■□□□□ 0.74
CPA4-205ENST00000474254 NECAB2Q7Z6G3 386 aa19.65■□□□□ 0.74
CPA4-205ENST00000474254 CRISPLD2Q9H0B8 497 aa19.65■□□□□ 0.74
CPA4-205ENST00000474254 MORF4L1Q9UBU8 362 aa19.65■□□□□ 0.74
CPA4-205ENST00000474254 USP17L10C9JJH3 530 aa19.64■□□□□ 0.73
CPA4-205ENST00000474254 MBD4O95243 580 aa19.64■□□□□ 0.73
CPA4-205ENST00000474254 UBE3CQ15386 1083 aa19.64■□□□□ 0.73
CPA4-205ENST00000474254 SLFNL1Q499Z3 407 aa19.64■□□□□ 0.73
CPA4-205ENST00000474254 CCAR1Q8IX12 1150 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms