RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 SFSWAPQ12872 951 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 FXNQ16595 210 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 EAPPQ56P03 285 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 N4BP2L2Q92802 583 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 RNF34Q969K3 372 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 CHMP4CQ96CF2 233 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 SLX1AQ9BQ83 275 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 SELENOOQ9BVL4 669 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 TEX13AQ9BXU3 409 aaPredicted RBP7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 STRN4Q9NRL3 753 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 GTF2A1LQ9UNN4 478 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 YTHDC2Q9H6S0 1430 aaKnown RBP7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 PIK3C2AO00443 1686 aa7.09□□□□□ -1.27
SMARCE1-208ENST00000474246 IQCA1LA6NCM1 817 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 NR1I2O75469 434 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 BAIAP3O94812 1187 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 KIF5BP33176 963 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 FANCCQ00597 558 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 NUCB1Q02818 461 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 EIF2B5Q13144 721 aaKnown RBP7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 ELOAQ14241 798 aaKnown RBP7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 WDR45BQ5MNZ6 344 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 CPXCR1Q8N123 301 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 DEFB123Q8N688 67 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 CCDC191Q8NCU4 936 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 STK32AQ8WU08 396 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 NELL1Q92832 810 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 PGBD4Q96DM1 585 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 PRDM11Q9NQV5 511 aa7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 RABL2AQ9UBK7 228 aaPredicted RBP7.09□□□□□ -1.28
SMARCE1-208ENST00000474246 CCDC18Q5T9S5 1454 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 FAM170AA1A519 330 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 BBOX1O75936 387 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 IDEP14735 1019 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 HOXD10P28358 340 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 SNX16P57768 344 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 BIRC3Q13489 604 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 SLMAPQ14BN4 828 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 SLC27A3Q5K4L6 730 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 ELOA2Q8IYF1 753 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 ASB16Q96NS5 453 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 METTL5Q9NRN9 209 aaKnown RBP7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 TRMT1Q9NXH9 659 aaKnown RBP7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 RABGEF1Q9UJ41 708 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 ZMIZ1Q9ULJ6 1067 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 VPS9D1Q9Y2B5 631 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 LAMB4A4D0S4 1761 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 ERBINQ96RT1 1412 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 A0A0C4DFX4 3053 aa7.08□□□□□ -1.28
SMARCE1-208ENST00000474246 PIEZO1Q92508 2521 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 PBX2P40425 430 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 MORC3Q14149 939 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 SEPT7Q16181 437 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 COBLL1Q53SF7 1204 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 ERAP2Q6P179 960 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 TDRD7Q8NHU6 1098 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 UCN2Q96RP3 112 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 FAM167BQ9BTA0 163 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 NGRNQ9NPE2 291 aaKnown RBP7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 MED4Q9NPJ6 270 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 SH3GLB2Q9NR46 395 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 LUZP4Q9P127 313 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 TAGLN3Q9UI15 199 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 ITM2BQ9Y287 266 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 MAFBQ9Y5Q3 323 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 BAHCC1Q9P281 2608 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 H0YGN5 161 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 CPLX1O14810 134 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 KIAA0754O94854 1291 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 NCAM1P13591 858 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 TGFB2P61812 414 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 PPP2R5BQ15173 497 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 PTPN14Q15678 1187 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 FILIP1LQ4L180 1135 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 AGAP9Q5VTM2 703 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 RASSF3Q86WH2 238 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 GABPB2Q8TAK5 448 aaPredicted RBP7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 ABCG4Q9H172 646 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 DIAPH3Q9NSV4 1193 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 TRIOBPQ9H2D6 2365 aa7.07□□□□□ -1.28
SMARCE1-208ENST00000474246 PARP4Q9UKK3 1724 aaKnown RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 PPM1FP49593 454 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 INHBEP58166 350 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 COX10Q12887 443 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 ACAP1Q15027 740 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 LRCH2Q5VUJ6 765 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 KIAA1614Q5VZ46 1190 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 RDH13Q8NBN7 331 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 C12orf49Q9H741 205 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 SEL1LQ9UBV2 794 aa7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 CFDP1Q9UEE9 299 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.06□□□□□ -1.28
SMARCE1-208ENST00000474246 CDC42BPAQ5VT25 1732 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms